Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00669 ATGATTTCTACTCGTTGTGCAGCTTGCAAGTATCTTCGGAGGAGATGCCCATCAGATTGCATATTTGCTCCATATTTTCCATCCAACAATCCACAAAGATTTGCTTGTGTTCACAAAATCTTTGGTGCCAGCAATGTTGGCAAAATGCTCAAGCAACTCCCAGTTCATCAACGAGCTCAAGCTGCTGATTCCTTATATTTTGAGGCTCTATCGCGGATTATGGATCCAGTCTATGGGTGCGTCGGGATCGTCTCTCTCCTGCAACAACAAATACAAAGTACACAACACCTGCTTGCCAAGACTCGAGCTGAGGTCGCCTTCAATGCTCGACAAGCTCATCTTCAAGGACAGTCTCATTTTCAACAAGTTGAAGCCTCCACTAACTTCAACAATTTCTTCCAAGAACCTCTCTACGATGATAAACCGTTCCTTGATTCGTTTATTCAAGCCCCGGGTTTCTCTAGCTTTGTAATGGATCAGACGTGA 486 0.4424 MISTRCAACKYLRRRCPSDCIFAPYFPSNNPQRFACVHKIFGASNVGKMLKQLPVHQRAQAADSLYFEALSRIMDPVYGCVGIVSLLQQQIQSTQHLLAKTRAEVAFNARQAHLQGQSHFQQVEASTNFNNFFQEPLYDDKPFLDSFIQAPGFSSFVMDQT* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00669 161 Coils Coil 84 104 - -
Eupl08g00669 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 124 - -
Eupl08g00669 161 Pfam Lateral organ boundaries (LOB) domain 5 101 IPR004883 -
Eupl08g00669 161 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00669 Eupl-Chr8 13663483 13664902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00669 1 106 AS2 family AT3G26660 67.925 3.24e-52 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl08g00669 LOB 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00669 - - pop:7482120 185.267