Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00664 ATGCAAAGCAAACACATGAGAACACTCTCCCCTACTCCCCAACTTCCCAACACCAAAACACCACCTCTCAATTCCTACTACCCTTCAATGGAGATCTTCAGGCACTATTCTGACCCACATGCCTCAAATTTCCGGTTAATCCGTGAACCGGAGACTCGTCAATCCGTCTTCTCCGACGAAGAAGTCTTACTAGCTTCAAGTTGTCCTAAACGACGTGCGGGTCGTAAGAAGTTCCGAGAGACACGACATCCAGTCTATAGAGGTGTTAGGCAGAGAAACGGCGATAAATGGGTGTGCGAGGTGCGCGAACCGAACAAGAAATCGCGTATATGGCTTGGAACATTTCCTACAGTTGAGATGGCTGCACGAGCACATGATGTTGCTGCAATGGCTCTTAGAGGACGATCGGCTTGTCTTAATTTTGCTGACTCAGCTTGGCGATTACCCGTGCCTGTCTCGGCGGATGCTAAGGATATACAAAAAGCAGCAGCTGATGCAGCAGAAGCATTCCGGCCATTGGAATTTGATGGAGTTTCAATAGATGAGTTAAAGCTGAAGGATTCGACGACGACGACGACAGAGAATGTGTTTTTTATGGATGAGGAGGCGGTTTTCGGCATGCCGGGCTTGCTTGCCAGCATGGCTGAAGGTTTGTTACTGTCTCCACCTTCTTGTGAGGGGAATGGGTCCAGTTTGGATAACATGGGAAGTGATGATGACGTGTCTTTATGGAGTTATTCTATTTAA 747 0.4793 MQSKHMRTLSPTPQLPNTKTPPLNSYYPSMEIFRHYSDPHASNFRLIREPETRQSVFSDEEVLLASSCPKRRAGRKKFRETRHPVYRGVRQRNGDKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAAMALRGRSACLNFADSAWRLPVPVSADAKDIQKAAADAAEAFRPLEFDGVSIDELKLKDSTTTTTENVFFMDEEAVFGMPGLLASMAEGLLLSPPSCEGNGSSLDNMGSDDDVSLWSYSI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00664 248 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Eupl08g00664 248 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 44 246 IPR045277 GO:0003700
Eupl08g00664 248 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Eupl08g00664 248 FunFam Ethylene-responsive transcription factor 2 84 143 - -
Eupl08g00664 248 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Eupl08g00664 248 MobiDBLite consensus disorder prediction 1 23 - -
Eupl08g00664 248 Gene3D AP2/ERF domain 85 143 IPR036955 GO:0003700|GO:0006355
Eupl08g00664 248 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Eupl08g00664 248 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Eupl08g00664 248 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Eupl08g00664 248 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00664 Eupl-Chr8 13574170 13575284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00664 30 246 AP2-EREBP Transcription Factor Family AT4G25480 58.296 8.66e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl08g00664 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00664 - K09286 nnu:104612692 283.878