Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00651 ATGCTCAGAGCTATTCAGTTTCTTGGTTTTTCTTCTGGGGTGGTTTCATCTCCGTTTCAGAGATTGAAACCCCCCGGGAAGAATGGCCTCTCGTTCTCGTCGATATCCACCAAGCCATCATCTTCGTCAAGAACAGCCCCTCTGTTCTTTACTTTCGTTTCTACTCGCGGGAGCGCTTGTTCCAGATCATTTCGACTCTTTACAATTCGTTCTGAATTGAGTCCAGATGATGGTTCTGATTCTTCTCCATCAGCTGCATTCCACCAGTTGGCCCATATGTGTAAGATCAGTTTCTGTCAATGGTGCGGTGCCCCAACAAAGCAAGCTGTTCCTGATGGAGATGATAAGATAAGAGCTGTTTGCACACTTTGTGGCACAATCACATATCAGAACCCCACAATGGTTGTCGGTTGTCTGGTTGAGCATGATGGCAAGGTCCTACTTTGCAAACGGAAGATTCAACCGGCTTATGGCCTTTGGACTCTTCCTGCTGGCTACATGGAAATTGGGGAGTCTGCAGTGGAAGGCGCAACCAGGGAAACCCTGGAAGAAGCGGGTGCAGAAGTGGAAGTGCTGTCTCCATTTGCTCAGCTGGACATCCCTCTTATTGGCCAAAGTTACATAATTTTCCGAGCAAGGCTGAAGAAGTTCCACTTTTCGCCTGGCCCTGAGTCTCTGGATTGTCAGCTTTTTGCGCTGGATGATATACCATTTGATTCTCTGGCATTTCAAGCAATGTTGGTTACCTTGAATCTGTACATCGAAGATTTGAAGGCCGGAAAACCCAAGTTTCACTATTGTACCATATGTAAGAGACCTGGCACCAGTCCATCTGATCTCCACAGCTACAATCTGGAAAACCTTTTGTAG 870 0.469 MLRAIQFLGFSSGVVSSPFQRLKPPGKNGLSFSSISTKPSSSSRTAPLFFTFVSTRGSACSRSFRLFTIRSELSPDDGSDSSPSAAFHQLAHMCKISFCQWCGAPTKQAVPDGDDKIRAVCTLCGTITYQNPTMVVGCLVEHDGKVLLCKRKIQPAYGLWTLPAGYMEIGESAVEGATRETLEEAGAEVEVLSPFAQLDIPLIGQSYIIFRARLKKFHFSPGPESLDCQLFALDDIPFDSLAFQAMLVTLNLYIEDLKAGKPKFHYCTICKRPGTSPSDLHSYNLENLL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00651 289 SUPERFAMILY Nudix 98 258 IPR015797 -
Eupl08g00651 289 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 131 282 - -
Eupl08g00651 289 Gene3D - 94 130 - -
Eupl08g00651 289 ProSiteProfiles Nudix hydrolase domain profile. 131 254 IPR000086 -
Eupl08g00651 289 Pfam NUDIX domain 136 236 IPR000086 -
Eupl08g00651 289 Coils Coil 285 289 - -
Eupl08g00651 289 PANTHER NUDIX HYDROLASE 23 98 285 - -
Eupl08g00651 289 ProSitePatterns Nudix box signature. 165 186 IPR020084 GO:0016787
Eupl08g00651 289 Pfam Nudix N-terminal 98 130 IPR029401 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00651 Eupl-Chr8 13164267 13169567 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl08g00651 NUDIX 1.8e-11 CL0261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00651 K18453 - nnu:104603559 385.571