Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00627 ATGTTTTCGTGTTCAAGAGTAACAAAGGAAAAGGAATCCGAAAAGGAGAGATGGTTTCTTGAGAACGGAGGTCGGTTATTAGAAGAGCTGATTAAATCTTGTGGCCGGAACTATTATCCCATCCGGACTTTCTCTAAAACAGAGCTTCAAGAGGCAACCAACAACTACGACCGCGTTCATATGGAAGGCAACTATAAGTTGTACGAGGGAAAATACGAAGACCGCAGCATTTTCGTCAAGAAGTTTAATACCAACAAAGGTATTCATAATGTTGAAAGTTGTATAAATGAAGTCGTCGTTGCATCACAAATGAAGAACCACAAGAACTTCTTGAAGCTCTTGGGCTGCTGCTTAGAGACCCAAGTACCAGAACTGGTGTATGAGTTTGCTGAGAATGGAAATCTCTATGATCATATCCATAAAAAAAAAGATTCAGAAAACAATCCACCGATATTATCTTGGGAGAGGAAGTTAAGGATCGCAACCGAGATTGCCGACGCAGTTTCCTATCTACACACCGCGGTTTCCAGGCCCATCATCCATAGAGACATAAAACCCCAAAATATTTTCTTGGATGAACAATTTAGTGTCAAGTTATTTGATTTTTCGCTCTCCGTGTATATACCCTTGGGGGAACTATACGTCGAAGCACCACTTTGTGGGACCTATACTTATATGGATTCTAGGATGCTTGCTACAGGACAAGTTACAGAAAAAAGCGATGTTTATAGCTTTGGGATTGTATTGCTTGAGATATTAACTGAAACGAGGGGTTATCAAGCATTAGGTGAGTTTCAAAGTCATAAATCAGATCGGAGGGGTTATCAAGCATTAGGTGAGTTTCAAAGTCATAAATCAGATCGGAGTAAGCGGTATTCGATGTCGGATGGTCGTTCTAGTTCGGTTGAGGAACATTGTGTTCAGTCTTGGCAAATGTTTATTCAACAGTATTTGAAGGCCAATATGTTGGATGAAGGAAACAAAGAGCAGTTGATGGCGTGTGCAGTGCTTGCTATGAAATGCCTCGAAGAAGAGAATCCTGAAGATAGGCCTACAATGAAGTCAGTCGCACAAGAGCTCAGGCGGATCAAAAAGATAGAGCCTACTTCATCTTAG 1116 0.4104 MFSCSRVTKEKESEKERWFLENGGRLLEELIKSCGRNYYPIRTFSKTELQEATNNYDRVHMEGNYKLYEGKYEDRSIFVKKFNTNKGIHNVESCINEVVVASQMKNHKNFLKLLGCCLETQVPELVYEFAENGNLYDHIHKKKDSENNPPILSWERKLRIATEIADAVSYLHTAVSRPIIHRDIKPQNIFLDEQFSVKLFDFSLSVYIPLGELYVEAPLCGTYTYMDSRMLATGQVTEKSDVYSFGIVLLEILTETRGYQALGEFQSHKSDRRGYQALGEFQSHKSDRSKRYSMSDGRSSSVEEHCVQSWQMFIQQYLKANMLDEGNKEQLMACAVLAMKCLEEENPEDRPTMKSVAQELRRIKKIEPTSS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00627 371 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00627 371 Gene3D Phosphorylase Kinase; domain 1 33 129 - -
Eupl08g00627 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Eupl08g00627 371 ProSiteProfiles Protein kinase domain profile. 38 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00627 371 Gene3D Transferase(Phosphotransferase) domain 1 130 370 - -
Eupl08g00627 371 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 8 364 IPR045274 GO:0007166
Eupl08g00627 371 SMART serkin_6 56 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00627 371 SUPERFAMILY Protein kinase-like (PK-like) 66 365 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00627 Eupl-Chr8 12363629 12365213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00627 14 364 Receptor kinase-like Gene Family AT1G16260 36.517 7.33e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl08g00627 Pkinase 8.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00627 - - ming:122061088 325.094