Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00624 ATGGACCTAGGGACGACGTTACTACAGTTTCCCGAGGAAGATACCATCATTTTCAACTTTATTAGCCCCCGTGTGGCTGCTCCGGAGTCTGGCCTAGGTTCTCTCTTTCTCTCTTCTCTAGGGTTTCCAATGGCGTTTGCGGGGCGTTTGAGATCAAATCTCCCTCTCATCCAGAAGATTCTGAGATCCGAGTCAGTTTTCACGCAGAGATCATGCCTTCAACGAAGCTCTGAACACCCTAGCTTCGCAACTTCTGTGTTTTCAAGGAATTATGCGAGTGCAACAGGATCAAAGGAAGCAAAAATTAAGGTGCCTCTGTCTTTGTTTGGGGGGTCTGGAAACTATGCCTCTGCTTTGTATATCTCGGCAATAAAGGCAAATGCACTGGACAAAGTTGAATCTGAGATTCTTGACATCGTTGCGGCTTCCAAGAAAAGTCCTTTGTTTTCACAGTTTATAAGGGATTTGTCAGTGCCTGGGGAGACCAGAGTAAAGGCTATAAATGAAATATGCTCTGAAGCTAAATTTTCTGATATCACAAAAAATTTTTTGGTTATTTTGGCTGAGAATGGGAGGCTAAGGCACATTGAGGGCATTGCAAAGAGTTTTGTGCAGTTGACCATGGCACATAGGGGAGAGGTGAAAGCCATTGTGACAACTGTCATTCCCCTCCCACCTGAAGAGGAAAAACAACTGAAGGAGACACTGCAGGAAATCATTGGACATGGGAAGAAGGTTAAGCTTGAACAGAAGATCGAGCCTAGCATTCTTGGTGGACTGGTGGTGGAATTCGAGCAAAAGGTTTTTGACATGTCTATAAGGACAAGGGCGCGGCAGATGGAGAGGTTCCTGCGGGATCCCATCAACTTTGATAGCATCTAA 882 0.4535 MDLGTTLLQFPEEDTIIFNFISPRVAAPESGLGSLFLSSLGFPMAFAGRLRSNLPLIQKILRSESVFTQRSCLQRSSEHPSFATSVFSRNYASATGSKEAKIKVPLSLFGGSGNYASALYISAIKANALDKVESEILDIVAASKKSPLFSQFIRDLSVPGETRVKAINEICSEAKFSDITKNFLVILAENGRLRHIEGIAKSFVQLTMAHRGEVKAIVTTVIPLPPEEEKQLKETLQEIIGHGKKVKLEQKIEPSILGGLVVEFEQKVFDMSIRTRARQMERFLRDPINFDSI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00624 293 PRINTS ATP synthase delta subunit signature 181 192 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 PRINTS ATP synthase delta subunit signature 244 259 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 PRINTS ATP synthase delta subunit signature 111 130 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 PRINTS ATP synthase delta subunit signature 192 206 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 PRINTS ATP synthase delta subunit signature 259 277 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 Pfam ATP synthase delta (OSCP) subunit 113 282 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 NCBIfam ATP synthase F1 subunit delta 114 283 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 Hamap ATP synthase subunit delta [atpD]. 107 286 IPR000711 GO:0015986|GO:0046933
Eupl08g00624 293 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 112 213 IPR026015 -
Eupl08g00624 293 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 246 265 IPR020781 GO:0015986|GO:0016020|GO:0046933
Eupl08g00624 293 Gene3D - 111 204 IPR026015 -
Eupl08g00624 293 PANTHER ATP SYNTHASE DELTA CHAIN 88 286 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00624 142 293 Primary Pumps ATPases AT5G13450 61.842 2.72e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00624 K02137 - nnu:104613014 355.14