Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00607 ATGAGATCCTTTGGTTCATTTCAGCTTATTTGGGTCATTTGGGGAGTTCTTTTTGTGTCTCGTGATTCCTTTGCATCTAATGAAGTTTTGGCTCTTACAGCCTTCAAGGAAGCTATATATGAGGACCCTTTAATGGTTTTGTCGGATTGGAATTCCCTCGATGCAGATCCTTGCAACTGGTCGGGCATTTACTGTTCGACGCCTCGAGATCATGTTATAACTCTAAACCTTTCTAGTTCATCTTTGAGGGGATTTCTTGTACCGGAATTGGGCTTATTGTCCTCCTTGCAAGGATTAATTCTACACAAAAACAATTTCCTTGGGACAATACCCAAAGAAATTGGCAAGTTGACAAGCCTCAAGGTCTTGGATTTGGGGATGAATCAACTGTCGGGGACGATTCCTCTGGATATTGGAAATTTGACTAGCGCTACAAAAATACACCTTCAATCTAATGGATTGACTGGGAGTGTTCCCCCTGAGCTTGGAAATTTGAAGAACCTTGTTGAACTTCGGCTGGATAGGAATAGACTTCAAGGAACTGTTCCAGGCAGCAACAACACAATTTTGACATCTAATGTACCTGGGATGTACACCTCTCGTGGAAATGCAACTGGTTTCTGCCGCTCATCTCAGTTAAGAAATGCAGATTTCTCATACAACTTCTTTGTTGGGAGAATACCGCAGTGCCTGAAATATCTTCCACGAACAAGCTTCCAAGGGAACTGTTTCCAAGACAGGGATTCCAAACAGCGTTCTACTCAGCAGTGTGTTGCTAGTCCACCTGCAAAAAGTCATCCAAGAATCAACTCAGAGCACCTTCATGCTGATGATGTATCTAAGAATCAGGGGGCATCAAAGCCTGTGTGGCTGTTAGCTTTAGAAATTGTAACAGGAACTGTCGCGGGTTTTCTCTTACTCTTTGCTGTTATCACTGCTGTCAAAAAATGTAAAGGAAAATCTCCTGTCGTAATCCCTTGGAAGAAAGCAGCTAGCAGGAAGGACCAGATGATAGTATACATAGATTCCGAGATGCTGAAGGACGTGGTGAGGTTGAGCAGACAGGAGCTTGAAGTAGCCTGTGAAGATTTTAGCAACATTATTGACTCCTCTCCAGACAGTTTAGTCTACAAAGGTACTTTGAAAGATGGCCCAGAGATTGCTGTGATATCACTGTGCATTAAGGAAGAGCACTGGACGGGATATCTTGAGTTTTATTTTCAGAGAGAGGTCGCAGATTTGGCAAGATTAAGTCATGAGAACACGGGAAAATTACTAGGCTATTGCAGAGAGAGCAACCCATTTACAAGGATGCTGGTCTTTGAATATGCATCAAATGGGACACTATACGAGCACCTCCACTACGGTGAAGGATGTCAACTATCTTGGACCCGGCGTATGAAAATCATTATTGGCATTGCTCATGCCCTAAGATATCTGCACTCGGAACTTGAGCCTCCATTCACAATATCAGAGCTAAATTCTAGTGCTGTCTATCTTACAGAAGATTTTTCTCCCAAGCTGGTAGATTTTGAAAATTGGAAGACAGTACTTGCAAGATCAGAAAAGAACTCGGGTTCCGTTGGCAACGGAGGTGTTTTTTGTGGTTTGCCGGATTCTCTAGAGACACGCCATCTAGATGTCCAAGGCAACACATTTGCTTTTGGAGTACTCTTACTGGAAATAATTAGTGGGAGACCCCCATACTGCAAAGACAGAGGGTGCTTGGTAGACTGGGCTAAGGAGTATCTAGAGCTGCCGGAAGTAATATCGTATCTGGTGGACCCTGAGTTGAGGCATTTCAGATATGACGATCTCAAAGTAGTATGCGAGGTTGTGAATCTTTGTATCCAGTCTGACTCTGCCAAGCGGCCATCCATGCAGGTATTGTGCCCCATGTTGGAGAATAGAATTGAAACGTCGATATCTGCTGATCTTAAAGTGTCTCCTTTGGCATGGGCTGAGCTTGCCATATCTTCATAG 1983 0.4357 MRSFGSFQLIWVIWGVLFVSRDSFASNEVLALTAFKEAIYEDPLMVLSDWNSLDADPCNWSGIYCSTPRDHVITLNLSSSSLRGFLVPELGLLSSLQGLILHKNNFLGTIPKEIGKLTSLKVLDLGMNQLSGTIPLDIGNLTSATKIHLQSNGLTGSVPPELGNLKNLVELRLDRNRLQGTVPGSNNTILTSNVPGMYTSRGNATGFCRSSQLRNADFSYNFFVGRIPQCLKYLPRTSFQGNCFQDRDSKQRSTQQCVASPPAKSHPRINSEHLHADDVSKNQGASKPVWLLALEIVTGTVAGFLLLFAVITAVKKCKGKSPVVIPWKKAASRKDQMIVYIDSEMLKDVVRLSRQELEVACEDFSNIIDSSPDSLVYKGTLKDGPEIAVISLCIKEEHWTGYLEFYFQREVADLARLSHENTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIAHALRYLHSELEPPFTISELNSSAVYLTEDFSPKLVDFENWKTVLARSEKNSGSVGNGGVFCGLPDSLETRHLDVQGNTFAFGVLLLEIISGRPPYCKDRGCLVDWAKEYLELPEVISYLVDPELRHFRYDDLKVVCEVVNLCIQSDSAKRPSMQVLCPMLENRIETSISADLKVSPLAWAELAISS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00607 660 Gene3D Ribonuclease Inhibitor 141 284 IPR032675 -
Eupl08g00607 660 PANTHER PROTEIN MALE DISCOVERER 2 22 659 - -
Eupl08g00607 660 Gene3D Transferase(Phosphotransferase) domain 1 444 648 - -
Eupl08g00607 660 Pfam Protein tyrosine and serine/threonine kinase 376 632 IPR001245 GO:0004672|GO:0006468
Eupl08g00607 660 Gene3D Phosphorylase Kinase; domain 1 327 443 - -
Eupl08g00607 660 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Eupl08g00607 660 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Eupl08g00607 660 ProSiteProfiles Protein kinase domain profile. 362 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00607 660 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Eupl08g00607 660 SUPERFAMILY Protein kinase-like (PK-like) 347 634 IPR011009 -
Eupl08g00607 660 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Eupl08g00607 660 SUPERFAMILY L domain-like 26 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00607 Eupl-Chr8 11857913 11867041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00607 96 636 Receptor kinase-like Gene Family AT1G75820 28.265 3.75e-51 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Eupl08g00607 PK_Tyr_Ser-Thr 5.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00607 - - ming:122085601 1029.24