Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00605 ATGGCTCTGCTTCGGTTCTTCCTATTAAATCTACTAATTTCTTTGATATGTGCAACATCCACATATGCAGATGCAGCAACTCAAGCAAAGCCCCGTTGCCCATGGAAATGTGGGAACATTAGTATTCCATTCCCTTTCGGCATCGGAAGGGGATGTTACAGGGACGAAGGATTTGAGATCACTTGCAATATGTCTGATTACTCTGATTACCGTCAGATACCTTATCTGGGTCAGAGTAGTAATGAAGTTCTAGAACTTTCTTTGGATCATGGAGTGCGCATCAACTTGTTGACAACAAGGAGAACTTACGATAAGTTAAACGATGGATCCGAATCCGGAGTTAACATATCCTTCTCAAGCACAAGCCCCTTCACCTTCTCCTACACCCGCAACAAGTTCACCGCTATCGGCTGCGACATCTACGCTTCTCTCACCAATGTTAACATCCAAAATTACACGAGCGGGTGCGTGTCGCTGTGTCGGGACGGCGAAATAACGGAGTCGCTGATCAACCGGTCGTCTTGCTCTGGCAATATTGGGTGTTGCCAAACAAATATCCCAAGTGGAGTCAAAGCATTAGATGTGCAGATCAACAGCATCGACACTCAATCCCGGTCTTGGGCTTCCAAGTATGACACTCAAATCGCTGCCTTGCACGACGGTGACCTGTTCAGCTCCATCAAATTCAATGGCTCCGATATTATGTTTCCGTTTTCTGCAGGTGCAGTGCTGGATTGGGCTATAGGGAACGAGACATGCGAAGACGCTCGGAAAAATGCGACAAGTTTTGCATGTGTAACGAACAGCCGCTGCCTCAACTCCTCTAACGGCCCAGGATATCGTTGTAACTGCTCTCGAGGTTACCAAGGGAATCCCTACCTCCCCAATGGCTGCCAAGATATTGACGAGTGCAAGATGGGTACAGACTACTGCAAAAAAGAAGCTCGTTGCCACAACACAGACGGGGGTTATTACTGTGAATGCCCACCTGGTACCCACGGCGACGGTAGAACATACGGAATCGGTTGTTCCAGCGGCACTAAAAGCTTTCCTGTGCTTGTGGTCACCGTAGGTATTGGCATCGGCGTAGCTCTACTAATTTTATTTGCTACCAGTTTCTGGTTCTATCGAGAACTAAAGAAAAGAAAGCACATCAAACTCAAACAAAAATTCTTCAAGCAAAATGGTGGTTCCTTGTTGCAACAACAAATCTTTTCACGGCAAGGCGGAGTTGAGAAAACCAAAATCTTCATGACGGATGAATTGGAAAGGGTGACAGACAACTTCAACGAGAGTCGAATACTTGGAAGGGGAGGCTCCGGTACAGTTTACAAAGGAATGCTATCGGATGGTAGAATTGTAGCCATCAAGAAATCCAAGATAGTGGATGAGAGCCAAATAGGGCAATTCATCAACGAGCTGGTCATTTTGTCTCAGATCAATCACAGGAATGTGGTGAAATTGTTAGGTTGTTGTTTAGAGACTGAAGTCCCATTATTGGTTTACGAATTTGTCTCCAATGGAGCCCTCTCCCATCATCTCCATTGTGACGATAATAAGTTCTCGATCTCTTGGGAAAACCGCTTACGGATTGCTAGGGAAATAGCAAGTGCACTCTCATATTTGCACTCATCGGCATCAGCACCGATCTTTCATAGAGACATCAAATCTAGCAACATACTCTTGGATGAAAATTATAGGGTTAAAGTGGCCGACTTTGGAATTTCAAGATCATTACCTTCTGATAAAACACACTTAACTACATTAGTGCAGGGGACATTCGGGTATTTGGATCCTGAGTACTTTCATTCAAACCAATTTACAGAAAAGAGTGATGTTTATAGTTTTGGAGTCGTCCTTGTGGAGCTCTTAACAGGTGAGAAACCAATTTCTTTTACTAGATCCGACGATGAGAGAAATCTAACTATGCATTTCTTATCATCGATGAAAGAGAATCGTCTATTTCAAGTTCTAGATGCTCGAGTAGTGAATGAAGGAGGGAAAGAAGAACTTTTGATTGTTGCAAAACTTGCAAAGAGATGCCTAAAATTGGTTGGAAAAAAGAGACCCACTATGAAAGAAGTGGCAGCAGAGTTGGAAGGGTTGAGAAGGTTTCAAGATCATCCATCAATTCCACAAAATTGGCAAGAACCGAAGTCCTGGGTTGGTGAACAATCAACTCTTTACATGAGTGGCCCAATCAGCCAAGATAGTATTGAGAACACTAAAGTCTTTCCATGGTCCTAA 2247 0.4393 MALLRFFLLNLLISLICATSTYADAATQAKPRCPWKCGNISIPFPFGIGRGCYRDEGFEITCNMSDYSDYRQIPYLGQSSNEVLELSLDHGVRINLLTTRRTYDKLNDGSESGVNISFSSTSPFTFSYTRNKFTAIGCDIYASLTNVNIQNYTSGCVSLCRDGEITESLINRSSCSGNIGCCQTNIPSGVKALDVQINSIDTQSRSWASKYDTQIAALHDGDLFSSIKFNGSDIMFPFSAGAVLDWAIGNETCEDARKNATSFACVTNSRCLNSSNGPGYRCNCSRGYQGNPYLPNGCQDIDECKMGTDYCKKEARCHNTDGGYYCECPPGTHGDGRTYGIGCSSGTKSFPVLVVTVGIGIGVALLILFATSFWFYRELKKRKHIKLKQKFFKQNGGSLLQQQIFSRQGGVEKTKIFMTDELERVTDNFNESRILGRGGSGTVYKGMLSDGRIVAIKKSKIVDESQIGQFINELVILSQINHRNVVKLLGCCLETEVPLLVYEFVSNGALSHHLHCDDNKFSISWENRLRIAREIASALSYLHSSASAPIFHRDIKSSNILLDENYRVKVADFGISRSLPSDKTHLTTLVQGTFGYLDPEYFHSNQFTEKSDVYSFGVVLVELLTGEKPISFTRSDDERNLTMHFLSSMKENRLFQVLDARVVNEGGKEELLIVAKLAKRCLKLVGKKRPTMKEVAAELEGLRRFQDHPSIPQNWQEPKSWVGEQSTLYMSGPISQDSIENTKVFPWS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00605 748 Pfam Wall-associated receptor kinase galacturonan-binding 33 92 IPR025287 GO:0030247
Eupl08g00605 748 Pfam Protein kinase domain 429 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00605 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Eupl08g00605 748 Gene3D Transferase(Phosphotransferase) domain 1 505 717 - -
Eupl08g00605 748 ProSiteProfiles Protein kinase domain profile. 429 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00605 748 SUPERFAMILY EGF/Laminin 299 335 - -
Eupl08g00605 748 Gene3D Phosphorylase Kinase; domain 1 401 504 - -
Eupl08g00605 748 FunFam Wall-associated receptor kinase 2 505 721 - -
Eupl08g00605 748 CDD EGF_CA 300 335 - -
Eupl08g00605 748 Pfam Calcium-binding EGF domain 300 332 IPR001881 GO:0005509
Eupl08g00605 748 Gene3D Laminin 250 303 - -
Eupl08g00605 748 Gene3D Laminin 304 339 - -
Eupl08g00605 748 FunFam Fibrillin 2 299 339 - -
Eupl08g00605 748 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Eupl08g00605 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Eupl08g00605 748 ProSitePatterns Calcium-binding EGF-like domain signature. 300 326 IPR018097 GO:0005509
Eupl08g00605 748 FunFam Wall-associated receptor kinase 2 399 504 - -
Eupl08g00605 748 SMART egfca_6 300 344 IPR001881 GO:0005509
Eupl08g00605 748 SMART egf_5 303 344 IPR000742 -
Eupl08g00605 748 SMART egf_5 252 299 IPR000742 -
Eupl08g00605 748 FunFam Wall-associated receptor kinase 2 251 298 - -
Eupl08g00605 748 CDD STKc_IRAK 435 702 - -
Eupl08g00605 748 SUPERFAMILY Protein kinase-like (PK-like) 413 699 IPR011009 -
Eupl08g00605 748 SMART serkin_6 429 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00605 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 706 IPR045274 GO:0007166
Eupl08g00605 748 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00605 Eupl-Chr8 11755456 11760376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00605 28 741 Receptor kinase-like Gene Family AT1G21230 43.338 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl08g00605 Pkinase 6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00605 - - msin:131223944 744.577