Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00602 ATGCCACTTGGCATGGCAGACCTTCCGAAGGCAGATAGCCAGAGGCAGCGGGGCAGCGTCATCTCTCTTTCTTCCTCTCTTTCTCTCTCCATCTCCGTCTCTATATATACCAACCGTTTCGCCCCTTCTCGAACCCATCCTCTGATATTTCCCAATTTATCTGTTTCACTTGTTTTCATAGAAGAAAAAAAAATGGAGAACATGACTCTCACAGGTTTATTGAAGCATACTGCCGGACAATTCCCTTCCCGGCGAGCTCTGTCAGTTTCCGGTAAATTCGATCTTACATACGCTCGGTTACAATACCTCATCGATCAAGCCGCCTCTCGCCTCATTTCCTCTGGCGTTAAGGCCGGCGAAGTTGTCGCTCTTACCTTTCCAAACACCATCGAGTTCGTGATTATGTTCTTAGCTGTGATCCGAGTTCGAGCCACCGCTGCGCCACTCAACCAAGCCTACACTAGGGAGGAGTTTGAGTTTTACTTATCGGACTCTGAATCAAAACTCCTACTCACCTCCCAAGAAGGGAACGGACCTGCTCAAGCCGCGGCGGCGAAACTCAACATTCCTCACACCACCGCCACGCTTTCTCACGCCGACGGCGAGGTCACTCTTTCTTCATCTCACCCCGAGTCGAAATCCGAGTCGTTGATTGACTCGGTGGCTGGGATTGTCAATAAACCATCTGATGTAGGGCTCTTCCTTCATACATCCGGCACGACGAGTCGACCTAAAGGCGTGCCGCTCACTCAGCTCAATCTCGCCGCGTCGGTACAGAATATCAAATCCGTTTACAAACTCACTGAGTCAGACTCAACAGTTGTCGTCCTCCCTCTCTTCCACGTGCACGGGTTACTCGCTGGGTTACTGAGTTCACTCGGTGCCGGAGCCGCCGTGACTCTCCCTGCCGCGGGACGATTCTCGGCATCGACGTTCTGGTCTGACATGCTCAAGTATAACGCCACGTGGTACACTGCAGTCCCTACAATTCACCAGATCATCTTAGATCGCCACCTCAACAAACCCGAGGCTGATTACCCGAAGCTGCGGTTCATACGTAGCTGCAGCGCGTCGCTCGCCCCAGCTATATTGGATCGGCTCGAGGAGGCATTCGGCGCGCCGGTCTTGGAGGCATACGCTATGACCGAGGCAGCCCATCTTATGGCGTCCAACCCGTTGCCAGAGGACGGTCCGCACAAGGCCGGGTCGGTTGGAAAACCGGTAGGGCAGGAGATGGCGATATTGGATGAGAACGGTGTACCACAACCGGCGCAAGTTAGCGGGGAGGTGTGTATACGTGGGCTAAACGTAACAAAGGGGTACAAAAACAACCCTGAGGCCAATAAGGCAGCTTTCAGTTTCGGGTGGTTTCATACGGGTGATGTCGGGTTTCTGGACGCAGACGGTTACTTGCATCTTGTCGGTCGAATCAAGGAGCTTATCAACCGTGGAGGGGAGAAGATATCACCGATTGAGGTGGACGCAGTCTTGTTGTCTCATCCAGACGTTGCTCAGGCAGTTGCTTTCGGAGTCCCGGACGATAAATATGGCGAAGAGATAAACTGTGCGATCATTCCTAGAGAAGGATCGGAAATCGAGGAGGCAGAAGTGCTGAGATTTTGCAAGAAGAACCTTGCAAGCTTCAAGGTCCCCAAGAAGATCTTCATTACCGATACTCTTCCAAAGACAGCTACTGGGAAGATCCAACGGCGTATCGTTGCAGAACATTTCCTTGCTCAAATCTCAGCCGCTAAAGTCCCCAAGTTCGGTGCATAA 1776 0.5225 MPLGMADLPKADSQRQRGSVISLSSSLSLSISVSIYTNRFAPSRTHPLIFPNLSVSLVFIEEKKMENMTLTGLLKHTAGQFPSRRALSVSGKFDLTYARLQYLIDQAASRLISSGVKAGEVVALTFPNTIEFVIMFLAVIRVRATAAPLNQAYTREEFEFYLSDSESKLLLTSQEGNGPAQAAAAKLNIPHTTATLSHADGEVTLSSSHPESKSESLIDSVAGIVNKPSDVGLFLHTSGTTSRPKGVPLTQLNLAASVQNIKSVYKLTESDSTVVVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRFSASTFWSDMLKYNATWYTAVPTIHQIILDRHLNKPEADYPKLRFIRSCSASLAPAILDRLEEAFGAPVLEAYAMTEAAHLMASNPLPEDGPHKAGSVGKPVGQEMAILDENGVPQPAQVSGEVCIRGLNVTKGYKNNPEANKAAFSFGWFHTGDVGFLDADGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDDKYGEEINCAIIPREGSEIEEAEVLRFCKKNLASFKVPKKIFITDTLPKTATGKIQRRIVAEHFLAQISAAKVPKFGA* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00602 591 FunFam Peroxisomal-coenzyme A synthetase 69 476 - -
Eupl08g00602 591 Pfam AMP-binding enzyme 75 483 IPR000873 -
Eupl08g00602 591 Pfam AMP-binding enzyme C-terminal domain 492 567 IPR025110 -
Eupl08g00602 591 PANTHER ACYL-COA SYNTHETASE 67 580 - -
Eupl08g00602 591 Gene3D - 477 580 IPR045851 -
Eupl08g00602 591 ProSitePatterns Putative AMP-binding domain signature. 234 245 IPR020845 -
Eupl08g00602 591 CDD FACL_fum10p_like 82 575 IPR045310 GO:0016874
Eupl08g00602 591 Gene3D - 61 476 IPR042099 -
Eupl08g00602 591 SUPERFAMILY Acetyl-CoA synthetase-like 63 581 - -
Eupl08g00602 591 FunFam 4-coumarate--CoA ligase 2 479 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00602 Eupl-Chr8 11707533 11711068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00602 67 581 Monolignol Biosynthesis Gene Families AT4G05160 29.135 3.39e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00602 K22133 - vvi:100256632 872.078