Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00593 ATGGGCTGTCAGTGCTCTAAACTCACGACTTGCTGGGATTCACATTTTAAGGGGCCAGTTCCTGAGGCTCCCGATGTCAAGAATGAGGAGAGGAGTGAGGTTGATGACTTGCCTGCATTCCGTGAATACACTTTTGAGCAACTTAGGATTGCTACATCAGGCTTTGCAGTGGAGAACATTGTATCTGAACATGGGGAAAAAGCTCCCAATATTGTTTATAAAGGGAAACTGGAGAATCAGATGCGGGTTGCTGTCAAACGCTTCAACAGAATGGCTTGGCCTGATGCACGACAGTTCTTGGAAGAAGCGAAATCTGTTGGTCTGCTCTGCAACCATAGATTGGCAAATTTACTTGGCTGTTGTTGTGAAGGTAATGAGAGGTTGCTCGTGGCAGAGTATATGTCCAACAATACGCTTGCAAAACACCTATTTCATTGGGAAACACAACCTATGAAATGGGCAATGCGATTAAGGGTGGTCCTATATCTTGCACAAGCTCTAGAATATTGTACTAGCAAAGGACGTGCCCTTTATCACGATCTTAATGCTTACAGAATTTTATTTGATGATGAGGGTGACCCTAGACTTTCATGCTTTGGTCTGATGAAGAATAGTAGGGATGGAAAAAGTTATAGTACAAATCTGGCATTTACCCCTCCTGAGTATTTAAGAACTGGAAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTTAGTGGAAAACACATTCCTCCCAGCCATGCCCTTGACCTGATACGCGATAGGAATCTTCAGATGTTAACGGATTCCTGTCTGGAAGGACAATTTTCAAATGATGATGGGACTGAATTAGTACGCTTAGCTTCTCGCTGTTTACAGTATGAGCCCCAAGAGCGGCCAAATACGAAGTCATTGGTTGCTGCTTTGACTCCTCTTCAGAAAGAAACCGAGGCTCCTTCTCACGTCCTGATGGGTATACCAAATGGTGATACACTCTTACCTCTCTCCCCACTTGGTGAAGCTTGCTCAAGAATGGATTTGACTGCCATACATGAGATCTTAGAAAAGATTGGGTACAACGATGACGAGGGAACAACAAATGAGTTGTCATTCCAAATGTGGACCAACCAAATGCAGGAGACACTGAACTCGAAGAAAAAGGGTGATGTTGCTTTCCGACACAAAGATTTCAGAGCTGCAATGGAATGCTACACCCAGTTCATTGATGGGGGAACCATGGTTTCTCCTACCATTTATGCACGCCGTTCCCTGTCATATCTCTTGAGCGACATGCCTCAGGAAGCTCTTAATGATGCAGTACAAGCCCAAGTCATATCCCCTGTGTGGCCCACTGCATCCTATTTGCAAGCTGCCTCCTTGTTCGCACTTGGAATGGAAAATGAAGCACAAGTAGCACTAAAAGAGGGTTCGGCCTTTGAAGCCAAGAAGAATGCAGCTTCCAGTCAATAG 1470 0.4449 MGCQCSKLTTCWDSHFKGPVPEAPDVKNEERSEVDDLPAFREYTFEQLRIATSGFAVENIVSEHGEKAPNIVYKGKLENQMRVAVKRFNRMAWPDARQFLEEAKSVGLLCNHRLANLLGCCCEGNERLLVAEYMSNNTLAKHLFHWETQPMKWAMRLRVVLYLAQALEYCTSKGRALYHDLNAYRILFDDEGDPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYEPQERPNTKSLVAALTPLQKETEAPSHVLMGIPNGDTLLPLSPLGEACSRMDLTAIHEILEKIGYNDDEGTTNELSFQMWTNQMQETLNSKKKGDVAFRHKDFRAAMECYTQFIDGGTMVSPTIYARRSLSYLLSDMPQEALNDAVQAQVISPVWPTASYLQAASLFALGMENEAQVALKEGSAFEAKKNAASSQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00593 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 16 484 IPR045845 GO:0004672|GO:0009742
Eupl08g00593 489 FunFam probable serine/threonine-protein kinase At4g35230 30 133 - -
Eupl08g00593 489 Gene3D Phosphorylase Kinase; domain 1 28 133 - -
Eupl08g00593 489 SUPERFAMILY Protein kinase-like (PK-like) 36 317 IPR011009 -
Eupl08g00593 489 FunFam probable serine/threonine-protein kinase At5g41260 135 326 - -
Eupl08g00593 489 SUPERFAMILY TPR-like 385 477 IPR011990 GO:0005515
Eupl08g00593 489 Gene3D Tetratricopeptide repeat domain 379 489 IPR011990 GO:0005515
Eupl08g00593 489 ProSiteProfiles Protein kinase domain profile. 58 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00593 489 FunFam probable serine/threonine-protein kinase At4g35230 379 488 - -
Eupl08g00593 489 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Eupl08g00593 489 Gene3D Transferase(Phosphotransferase) domain 1 135 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00593 Eupl-Chr8 11375713 11416896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00593 21 309 Glycoside Hydrolase AT3G07070 34.675 2.55e-43 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl08g00593 PK_Tyr_Ser-Thr 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00593 K14500 - nnu:104596081 857.825