Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00591 ATGGATCCCAAGCTCTCCCTCCCATCAAAAGTCAACAACAGACGATATATCGAATCCCCTCTCTCTTCAGACAACAGCTTCCCCATCTTGTTATTTGCCATACTTGTAATCACTGCCACAACTTTCTTGTTGGTGAGCTACTATATTTTTGTGATCAAATGCTGCTTGAATTGGTACCTTAACGATTTCCTAAGACATTTTCCTATGTCACAAGCTGGAGGACATGATGACTTCTTAATGGCCTATGATGCTGCAATCGAGAATCGCAGTCTCGATGACTCTGTCATCTGGGCAATTCCAATTTTTCAATTCAAGAGAGGATGA 324 0.4167 MDPKLSLPSKVNNRRYIESPLSSDNSFPILLFAILVITATTFLLVSYYIFVIKCCLNWYLNDFLRHFPMSQAGGHDDFLMAYDAAIENRSLDDSVIWAIPIFQFKRG* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00591 107 PANTHER RING-H2 FINGER PROTEIN ATL16 17 106 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00591 Eupl-Chr8 11363145 11363468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00591 22 106 C3H Transcription Factor Family AT1G04360 51.765 1.09e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00591 - - nnu:104600856 118.627