Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00590 ATGAAGTTCCACCATGTTTCAAGCATGGGAGATGAGTGCATTGATATTACAGGGAAAGATGATCAGTTCTCAATCCAGACCATCAGGAGATCTTTGTCTATGGACTCTTCAACCGACCTACAGCTGTACCTATCTGTTCAAGAGATCATACAACAGAACAGGCATCTCAATGAGGTTAACACCAATGAAGCTGGGATTGAACCTGCAGCCTCAAGGTTGGAAGATGAGAATGCCATTGATGAAGTCATGGGTTTCACAACAAATTGA 267 0.427 MKFHHVSSMGDECIDITGKDDQFSIQTIRRSLSMDSSTDLQLYLSVQEIIQQNRHLNEVNTNEAGIEPAASRLEDENAIDEVMGFTTN* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00590 88 PANTHER RING-H2 FINGER PROTEIN ATL16 2 61 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00590 Eupl-Chr8 11361529 11362572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00590 2 56 C3H Transcription Factor Family AT1G04360 66.667 7.42e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00590 - K19041 ming:122076136 105.531