Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00568 ATGCCTCTCTCCAAAGATCTCGTCATGAATTCCCAATCTGAATATCGGGCAAAAGAACATGGGGAGTTCAATAGCTCAATTGCAGCTGTTAATGGGGATGCTGTTGAATCACCAGTCAATGCCAATATTGAGGTTGAGGGTAAACTACGTGCGGATTTGTTGGATTGGTTAAATGGTATGGTTCCTTATCTGAGGTTGCCACTGGAAGCTTCAGAAGAGGAAGTGAGAGCGTGCTTGATTAATGGGACTGTCTTATGTAACATTCTGAACAGGCTGAATCCTGGATCTGTAGATGAGGGAGGTAGTTCTGATTTTTCTTCTGAGCCGCACTTTCAGAATGTCAAAAAGTTTCTGGTAGCCATGGATAAAATGGGGTTGCCGAGGTTTGATGTGTCAGATCTAGACCAGGGACCTATGACACCAGTGTTGGAATGCCTTTTGAAACTTAGAGCACAATTTAATTCTTATCTTGTGGGACATGATGTTCATATTACAAGTTCAATTTCTAAGTCTGAAAATCATCCAAGGAAGAAATGGGAACTCTCAGAAGTAGAACGTTTACAGGGAACTGATTGTTCCCAAGGGGATCTATCGTCACGTGGGCAGAATTCTTCCATATCTGGAGAAGAGAGGCGGAAGATTTTGTCAGACTCAAAATTTCAACGTGTTTTGCGCAGTCCTGTCATGTCAGAGCCATCAGCAGCATTGATGCATCATGTTGGACATAAGTTTCATGAGGTGTTTCAACTGAAACAGGGACGCTATGCTGATCTTCCTGCTGCTAAGATTTCGGAGATGATGAAATCAAACAGTTTAGATAATGCCCCAACTCAATCACTTTTGAGTGTTGTGAATGGGATTCTAGATGAAAGCATTGACAGGAAGAATGGGGAAATACCTCATCGTGTAGCATGCTTGCTGAGAAAAGTTGTGCTAGAGATTGAGAGGCGAATTTCAACTCAAGCAGAACATATAAGAATTCAAAACAATCTGCACAAGGCTCGTGAAGAGAAGTATCAGTCAAGAATCAGAGTACTTGAAACCCTTGCGACTGGGACTGGTGAGGAGACCCAGATTGTTATGAACAAGCTGCAGCAGATGAAGACTGTGAAGACCCAATTGGAAGAAAGGAAAAAATTTGAGGAGCAGGACGTGGCTAGATTAATGAAAGAGAAGGACCAGAGTGATCTTGAAATTTCAGTGCTGAAGCAAGAAATAGAAATAACCAAGAAGACACATGAACAACGTTGTGAGCAATTGGAAACGCAGGCTAAGGAAACTCAGGTTGAGTTAGAGAAGAGGTTAAAGGAACTTGAGTGCCTCCTAACAGATTCAAGGAAGAAGGAGGAAGAACTTGAGGCATTTTCTTCATTGAAAGCTCAGAGTTGGTACAAGAAAGAACACAGCTACCAAGGTTTCATAGATTTTCAGTTCCGAGCTCTGCTGGAATTAAGAGTGGGTTCTGAATCCATCAAGCAGGAAGTTGTAAATACACAAAGAAGCTGTTCAGAGGAATTGTGTCGCTTGGGCACAACACTTGAAGGATTAGCAGATGTAGCTGAAAATTATCATATGGTTCTTGCAGAAAACCGGAGGCTGTATAATGAGGTTCAAGACTTAAAAGGAAATATTAGAGTATATTGTCGGATAAGGCCATTCCTTCCTGGACAGAATGGAAAGCAAACAACCATAGAGTATATTGGCGAGAATGGGGAGTTGGTTGTTGTAAATCCCTCCAAACAAGGAAAGGAAAGCCATCGTGTTTTCAAGTTTAACAAGGTCTTTGGTCCAGCAGCCACTCAAGAGGAGGTATTTTTAGATACTCAACCATTAATACGGTCTGTTCTTGATGGATACAATGTGTGCATCTTTGCTTATGGTCAAACTGGTTCAGGAAAGACTTACACAATGAGTGGCCCCAATGCGTCATCTAGAGAGGACTGGGGGGTCAATTATCGAGCTTTAAATGACCTTTTCCATCTCTCTCAAAATAGGAGAAGCTCCTTCACGTATGAAATTGGCGTTCAAATGGTTGAAATATACAATGAAAAAGTTCATGATTTGCTCTCAAGTGATGGTCCCCAGAAAAGACTTGGGATTTTGAGTAGTACTCAACCCAATGGACTAGCTGTCCCTGATGCCAGCATGCACCCTGTCAAATCAACGACGGATGTCCTGGAATTGATGCATATTGGACAAATGAACAGGGCTGTAGGTGCCACCGCCATGAATGAAAGAAGTAGCCGATCCCACAGTGTTCTCACTGTTCATGTTCATGGCACGGACTTGGAGACTGGTGCTGCTTTGCGTGGTAGTCTTCATCTGGTAGATCTTGCTGGAAGTGAAAGAGTGGATCGCTCTGAGGCAACTGGAGACAGGCTCAGGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTCGTCTATGCTCTAGCACAAAAGAGCCCTCATGTACCATACAGAAACAGCAAACTAACTCAAGTCCTTCAGAGTTCTCTAGGTGGTCAAGCAAAGACCCTCATGTTTGTACAGCTTAATCCCGATGTGGATTCATATTCTGAGACTGCAAGTACCTTGAAGTTTGCTGAAAGGGTCTCTGGAGTTGAGCTAGGAGCTGCACGGAGCAACAAAGAGGGCAGGGATGTTAGAGAATTAATGGAACAGGTGGCGTCCCTTAAGGACACAATTGCAAAGAAAGATGAGGAGATTGAGCGTTTGCAACTGCTTAAAGATCTAAAAACTGTGTTCCCTAGTGTCAGTGGCGAGAAACGTGGTGTAAGCTCATTAAGGCATGGATCTGCCTCTCCGAGCAGACACTCCCTCGGTGGGGCTCCAGAACAGAGCCGTAGACTGTCGGGTGGGAAAGGCTCAGAACTTATTGACAAAGCAGCTTCTGATCCGGACAATTGCTCGGAGTACAGTGATAAGCATTCTGAAGCTGGTTCTCAGCAGTCATTGGATGACTTTAGGCACCATAAGGAATTTTTTCGACAGTCAAACCTTTCCGTAGGGGTTATAGATCAGAATGCTCCTGCAGATGTTGAGCTCTTAGGCTTTGATGATGCAGATTCTGAGGAGAGATTAAGTTATATATCTGATGGTGGCCTTTCCATGGGAACTGAAACTGACGGCTCAATAAGCAGTGTTGTTGAGTTCACCCCGACTCCTGAAGGTGCAAAACCGGCAGAGAGCACAGAGAAGCCCAAAGTACCTACTAAACTTCCTCGACCACCACAAAAGCAGGGGCAAACGGCATTGGTTCGACCATCATCATCAAAGGATTCTTTGAAGGTGTCGACAAGTTTGAGGAAAAGCACTACTAGTGGCTCTTCAGCCAGGCCCTCCAAACGCTGGCAGTAA 3369 0.4399 MPLSKDLVMNSQSEYRAKEHGEFNSSIAAVNGDAVESPVNANIEVEGKLRADLLDWLNGMVPYLRLPLEASEEEVRACLINGTVLCNILNRLNPGSVDEGGSSDFSSEPHFQNVKKFLVAMDKMGLPRFDVSDLDQGPMTPVLECLLKLRAQFNSYLVGHDVHITSSISKSENHPRKKWELSEVERLQGTDCSQGDLSSRGQNSSISGEERRKILSDSKFQRVLRSPVMSEPSAALMHHVGHKFHEVFQLKQGRYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILDESIDRKNGEIPHRVACLLRKVVLEIERRISTQAEHIRIQNNLHKAREEKYQSRIRVLETLATGTGEETQIVMNKLQQMKTVKTQLEERKKFEEQDVARLMKEKDQSDLEISVLKQEIEITKKTHEQRCEQLETQAKETQVELEKRLKELECLLTDSRKKEEELEAFSSLKAQSWYKKEHSYQGFIDFQFRALLELRVGSESIKQEVVNTQRSCSEELCRLGTTLEGLADVAENYHMVLAENRRLYNEVQDLKGNIRVYCRIRPFLPGQNGKQTTIEYIGENGELVVVNPSKQGKESHRVFKFNKVFGPAATQEEVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNASSREDWGVNYRALNDLFHLSQNRRSSFTYEIGVQMVEIYNEKVHDLLSSDGPQKRLGILSSTQPNGLAVPDASMHPVKSTTDVLELMHIGQMNRAVGATAMNERSSRSHSVLTVHVHGTDLETGAALRGSLHLVDLAGSERVDRSEATGDRLREAQHINKSLSALGDVVYALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVDSYSETASTLKFAERVSGVELGAARSNKEGRDVRELMEQVASLKDTIAKKDEEIERLQLLKDLKTVFPSVSGEKRGVSSLRHGSASPSRHSLGGAPEQSRRLSGGKGSELIDKAASDPDNCSEYSDKHSEAGSQQSLDDFRHHKEFFRQSNLSVGVIDQNAPADVELLGFDDADSEERLSYISDGGLSMGTETDGSISSVVEFTPTPEGAKPAESTEKPKVPTKLPRPPQKQGQTALVRPSSSKDSLKVSTSLRKSTTSGSSARPSKRWQ* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00568 1122 Pfam Calponin homology (CH) domain 50 153 IPR001715 GO:0005515
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 1033 1122 - -
Eupl08g00568 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 909 IPR027417 -
Eupl08g00568 1122 SUPERFAMILY Calponin-homology domain, CH-domain 50 162 IPR036872 -
Eupl08g00568 1122 ProSiteProfiles Calponin homology (CH) domain profile. 47 154 IPR001715 GO:0005515
Eupl08g00568 1122 Gene3D Kinesin motor domain 485 873 IPR036961 -
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 190 212 - -
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 926 987 - -
Eupl08g00568 1122 Gene3D - 382 421 - -
Eupl08g00568 1122 SMART kinesin_4 541 879 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 485 873 - -
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 1038 1055 - -
Eupl08g00568 1122 PRINTS Kinesin heavy chain signature 772 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 PRINTS Kinesin heavy chain signature 821 842 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 PRINTS Kinesin heavy chain signature 741 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 PRINTS Kinesin heavy chain signature 618 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 SMART ch_5 49 149 IPR001715 GO:0005515
Eupl08g00568 1122 PANTHER KINESIN-LIKE PROTEIN KLP-3 376 1091 IPR027640 GO:0003777|GO:0007018
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 190 205 - -
Eupl08g00568 1122 ProSiteProfiles Kinesin motor domain profile. 543 871 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 971 987 - -
Eupl08g00568 1122 ProSitePatterns Kinesin motor domain signature. 771 782 IPR019821 GO:0003777|GO:0005524|GO:0007018
Eupl08g00568 1122 Coils Coil 364 448 - -
Eupl08g00568 1122 Pfam Kinesin motor domain 549 869 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Eupl08g00568 1122 Coils Coil 885 912 - -
Eupl08g00568 1122 Gene3D - 41 155 IPR036872 -
Eupl08g00568 1122 MobiDBLite consensus disorder prediction 1080 1122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00568 Eupl-Chr8 10593177 10650715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00568 531 905 Calmodulin-binding Proteins AT5G65930 40.160 5.85e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00568 K10406 - ming:122079288 1600.88