Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00563 ATGGCTCCACAACAGCCCAAAAGCGGCCTTTTTGTGGGATTAAACAAAGGCCACATTGTAACCAAAAAAGAATTGGCTCCACGCCCGTCTGCTAGAAAAGGAAAAACCAGTAAAAGAGTCCATTTTGTGAAGAATCTCATCAGGGAAGTTGCTGGTTATGCACCTTATGAGAAGAGAATCACTGAACTTCTCAAAGTTGGGAAGGACAAGCGTGCTTTGAAAGTGGCAAAGAGAAAGCTGGGCACTCACAAGAGAGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCCGCAAGATGAGGTCTGCTGGAGTTGGAGAGAAGAAGAAGTGA 333 0.4535 MAPQQPKSGLFVGLNKGHIVTKKELAPRPSARKGKTSKRVHFVKNLIREVAGYAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVGEKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00563 110 Coils Coil 83 103 - -
Eupl08g00563 110 MobiDBLite consensus disorder prediction 79 110 - -
Eupl08g00563 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Eupl08g00563 110 MobiDBLite consensus disorder prediction 87 110 - -
Eupl08g00563 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
Eupl08g00563 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Eupl08g00563 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Eupl08g00563 110 FunFam 60S ribosomal protein L36 1 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00563 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.357 4.96e-58 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00563 K02920 - ming:122081005 206.453