Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00546 ATGCCTCCATGGTGGGGAAAGTCTTCATCCAAAGAAGTAAAGAAGAAAACAAACAAGGAGAGTTTTATTGATACACTACAGCGGAAATTTAAAACTTCATCTGTAGAAAAAGGTAACATTAGATCAGCGGGGTCTCGAGGACTTAGTAGTGATACAGTTTCAGAGAAGGAATCTCGATCCCGGGCTGAGTCAAGATCACCATCACCCTCCACACAAGTGTCACGGTGTCAAAGTTTTGCTGAGAAGCTACATGCACAGCCACTTCCACTTCCTGGTGTGCACCCCGCAGGCATAGGTCACACGGATTCTGGAATCAGTATACCAAGACTAGAAGTGGAAAAGCGTTCCCAGCCATCATTGCTTTTTCCTGTCCCTGTTCGTATTCCAAACAGGCTAGACACTGCAGATTTTGATACTGCTTCCGTTTGTAGTGGTAGCTCTATTGATAGCGATGATCCACCTGACTCGCGTCATCTTAGCCCCCTGGCATCTGACTGCGAAAATGGGTGCAGGACTGCTGCAAACAGCCCTTCCAGATTGCACAAGGATCAATCCCCTATAATCACCCGAAAGAACTCTAAAGAGTCACTAAAGCCAGCTAATCTGTTGTTCAATAATCATATAGTCTCTACGTCGCCTAGACAGGTGCCCTTAAGCACTTATGCACCCACTTTACAGATTCCTCACCATGGTGCTAGTGCTCCAGACAGCTCGATGTCAAGTCCTTCTAGAAGTCCTATGAGAGTGTTTGGCAACGAGCAAATTACAAGCTCTGCATTTTGGGCAGGGAAGCCTTACCCAGATGTTGGTCTGCTTGGATCTGGCCACTGCTCCAGTCCAGGTTCCGGTCACAATTCTGGACATAATTCAATGGGAGGAGATATGTCAGGACAGTTATTTTGGCCGCATAGCAGGGGTAGCCCTGAGTGTTCTCCTTTGCCTAGCCCCAGAATGACAAGCCCTGGCCCTAGCTCCAGAATACATAGTGGTGCTGTCACTCCTCTGCATCCACGGGCTGGAGGGACAGCTACAGAAACACCGACTAACTGGCCTGATGATGGGAAACAACAAAGCCACCGTTTACCCCTTCCCCCTTGTAGTTCTCCTTTTTCTCCATCAAGTCCTGTGGCAACAACATCATCCCCAGTTCAAACGGGAAGGACAGAGAATCCAACAAGCCCTGGTTCACGCTGGAAGAAGGGAAAACTGCTAGGTAGAGGCACATTTGGACACGTTTATCTTGGTTTTAACAGTGATAGTGGTGCATTGTGTGCAATGAAAGAGGTTACACTATTTTCGGATGATGCTAAGTCAAAGGAAAGTGCAAAGCAATTAGGGCAAGAAATTACTCTACTAAGTCGCTTGTGGCATCAGAATATAGTGCAGTATCTTGGATCCGAAACAGTAGATGATAAACTGTATATATACTTGGAGTATGTTTCTGGTGGCTCCATTTATAAGCTTCTTCAAGACTATGGGCAGTTTGGTGAACTAGCAATCCGTAGTTTCACTCAGCAAATCCTTTCAGGCCTTTCTTATTTGCATGCTAAGAATACTATCCATAGGGATATTAAAGGAGCAAATATACTTGTCGACCCCAATGGCCGGGTCAAGTTGGCTGATTTTGGGATGGCAAAGCATATAACTGGGCAATCATGTCCACTATCGTTCAAAGGAAGCCCTTACTGGATGGCACCTGAGGTTATAAAGAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGTCTTGGGTGCACCGTTTTGGAGATGACTACAGCAAAACCACCTTGGAGCCAGTATGAAGGGGTTGCTGCTATGTTTAAGATCGGGAATAGTAAGGAACTTCCAGTAATTCCTGATCATCTCTCGGATGATGGCAAGGATTTTGTAAGGCAGTGTTTGCAACGCAATCCACTACTTCGCCCTACAGCTGCTCGGCTTTTGGAGCACCCTTTTGTGAAAAATGCAGCTCCTTTGGAAAGACCCATTATGGGCTGTAAGCCTTCAGAACAACCTCCAGGAGTTTCAACTGGTGTGAGATCTATGGGCTTGGGGCATGCAAGAAACCTTTCCTCCTTGGACTCAGAAGGACCAGCAATTCATCAGTCTAGAGGTGCAAAATCTGGTCCAGCATCCAGTGATAGCCATGTGCCAAAGAACATATCTTGTCCAGTCTCTCCCATTGGAGGCCCTCATCTACATTCAAGATCACCACGTCACATGAATGGAAGGATGTCTCCGTCTCCCATATCCAGCCCTCGTACCACTTCTGGATCGTCCACCCCTCTCACTGGTGGCAATGGTGCCATTCCATTTCATCACATGAATCAGTCGGCTTACGTGCATGAAGGCTTTGGAAGCATGCCAAGGTCCCCGAACAGCCCCTATGTAAATGGCTCCAACTATCATGACCCCAAGCCCGACTTTTTTCTTGGGATGCAAGCAGTTTCTCATGTCTTCCGGGAACAGATGGCATCTGATAATGATGTTCTGGGAAAGCCCTTTCGAAGACCTGCCCATGGGGACCCCAGGGAACTGTATGATGGACAGTCCGTGCTGGCCGATCGCGTGTCTCAGCAGCTCTTGAGGGATCATGTGAAGTACCTTAATCCTGGCTCTCCCCTGCTCGGCCGTGCCAATGGTATCTGA 2652 0.4732 MPPWWGKSSSKEVKKKTNKESFIDTLQRKFKTSSVEKGNIRSAGSRGLSSDTVSEKESRSRAESRSPSPSTQVSRCQSFAEKLHAQPLPLPGVHPAGIGHTDSGISIPRLEVEKRSQPSLLFPVPVRIPNRLDTADFDTASVCSGSSIDSDDPPDSRHLSPLASDCENGCRTAANSPSRLHKDQSPIITRKNSKESLKPANLLFNNHIVSTSPRQVPLSTYAPTLQIPHHGASAPDSSMSSPSRSPMRVFGNEQITSSAFWAGKPYPDVGLLGSGHCSSPGSGHNSGHNSMGGDMSGQLFWPHSRGSPECSPLPSPRMTSPGPSSRIHSGAVTPLHPRAGGTATETPTNWPDDGKQQSHRLPLPPCSSPFSPSSPVATTSSPVQTGRTENPTSPGSRWKKGKLLGRGTFGHVYLGFNSDSGALCAMKEVTLFSDDAKSKESAKQLGQEITLLSRLWHQNIVQYLGSETVDDKLYIYLEYVSGGSIYKLLQDYGQFGELAIRSFTQQILSGLSYLHAKNTIHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMTTAKPPWSQYEGVAAMFKIGNSKELPVIPDHLSDDGKDFVRQCLQRNPLLRPTAARLLEHPFVKNAAPLERPIMGCKPSEQPPGVSTGVRSMGLGHARNLSSLDSEGPAIHQSRGAKSGPASSDSHVPKNISCPVSPIGGPHLHSRSPRHMNGRMSPSPISSPRTTSGSSTPLTGGNGAIPFHHMNQSAYVHEGFGSMPRSPNSPYVNGSNYHDPKPDFFLGMQAVSHVFREQMASDNDVLGKPFRRPAHGDPRELYDGQSVLADRVSQQLLRDHVKYLNPGSPLLGRANGI* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00546 883 MobiDBLite consensus disorder prediction 1 20 - -
Eupl08g00546 883 FunFam Mitogen-activated protein kinase kinase kinase 396 678 - -
Eupl08g00546 883 SUPERFAMILY Protein kinase-like (PK-like) 396 743 IPR011009 -
Eupl08g00546 883 CDD STKc_MEKK1_plant 397 654 - -
Eupl08g00546 883 SMART serkin_6 398 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00546 883 ProSitePatterns Protein kinases ATP-binding region signature. 404 427 IPR017441 GO:0005524
Eupl08g00546 883 MobiDBLite consensus disorder prediction 36 51 - -
Eupl08g00546 883 Pfam Protein kinase domain 399 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00546 883 MobiDBLite consensus disorder prediction 664 683 - -
Eupl08g00546 883 ProSiteProfiles Protein kinase domain profile. 398 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00546 883 MobiDBLite consensus disorder prediction 169 183 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 689 773 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 372 395 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 742 767 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 64 78 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 144 186 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 707 721 - -
Eupl08g00546 883 Gene3D Transferase(Phosphotransferase) domain 1 396 670 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 27 78 - -
Eupl08g00546 883 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 664 - -
Eupl08g00546 883 MobiDBLite consensus disorder prediction 303 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00546 Eupl-Chr8 10093194 10107639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00546 3 881 MAP Kinase Kinase Kinase AT1G63700 59.468 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl08g00546 Pkinase 3.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00546 K20717 - ming:122090571 1275.38