Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00529 ATGGTTTTGCAATTGTGGCTTCATCTCATAATCTTGTTATGGGTAACAACGTCGGCATTATGTTCCGATACAAAACCCGAATGTCAAGAAAAATGTGGGAACGTTAGTGTTCCCTACCCATTCGGCTTTGGAGATTCAAAATGTTTCAGAGACGAAGGATTCGTGTTATTTTGCAATGGTACGGTACTGTCTGTAGACGAAGATCATAACATACCTGTTCATGATATATCGTTAAACGGCCAAATGCGAATAAACGTTTATGTATCCAATGACTGTTACGACGAGTCGGGAGTACTATCCAGTCAGTTCTACACTTGGATCACATTGGGGGATAGACCGTACAGGTTCTCGGTTACCCGAAACAAGTTTACAGCTATTGGTTGTGACACACTAGCTTATGTGACGGACTATGATGGCGAAGTCTTCACAAGCGGGTGCGTTTCCATTTGTAACAATAACGAGCATGTCGAAGATTCTTGCTCGGGTATCGGTTGCTGCCAGACCTTCATCCCGGAGAATCTCCAGGCATATAACGTAACGTTCTATAGCTTTTACAACCATAACAACTCCTGGGAATTCAATCCATGCAGCTACGCCTTCCTGGTGGACAAAGACTGGTTCAACTTCTCTGCATCATATCTTAAAGATTTTCAGTATGAAAGAGTTCCGGTGGTGTTGGACTGGGTGATATTAAACCAGACATGCGAAGAAGCTGTAAAGAACACGTCTACTTATGCATGCCACAACAACAGCAACTGCTCCAACTCGGCGAGCGGCGGCGGCGGCGGATATCTTTGCAATTGTTTAGAAGGTTACAAAGGGAACCCTTATCTCCCCCAAGGATGCCAAGATATTGACGAATGTGCAAATCCAAGCGAATACCCTTGCAATGGGACTTGCATTAATACCCCAGGGAATTACTCTTGCATTTGCCCCCGCGGAGCACATGGTGATGGTAAAGACAGTTGCGTCAAAAATGAAAACAAATTTTCGGTGGTTCCAGTTTCTATAGTTATTATATTGGGCGTTTTTACTCTATTTGCTGGTAGTTACTTGTTACATGAGGCACTCAAGAAAAGGAAGCTCATCAAACTTAGAGAGAAATTCTTTCAGAAAAATGGAGGTTTGTTATTACATCAACAGAGGGCTAAGATCTTCACGGCAGAAGAACTCGAAGAGGCAACAAACCATTACGACGTAAGTCAAATTGTTGGGAGAGGAGGCTACGGTACAGTTTACAGAGGAATGTTAACAGATCAGAGAATAGTTGCCATTAAGAAGTCCAGAATGGTTGATGAGAGCCTGATGGTGGATGAGAGCCAAATTCAGCAATTTGTAAATGAGGTTTGCATTCTTTCTCAGATCAACCACCGGAATGTCGTTAAGCTCTTGGGTTGTTGTTTAGAGACTAAAGTTCCCATGTTAGTTTATGAATTTGTCTCCCATGGAACCCTCTCGCAACATATCCACAAGGAGGGCCGGCATACACCCTTAATGTCCTGGGAAAATCGTTTAAGGGTTGCTGCTGAAACTGCTGAGGCACTTGCTTATTTGCATTCTGCGGCTTACCCACCAATCATCCATCGAGATGTGAAATCTACCAACATACTCTTGGATGAAAATAACACCGCGAAAGAGCTTTTGACGGGAAAGAAGCCAATTTCTTCGGGGAGATCACAAGAAGAGAAAAACTTAGTAAAGTACTTCATTTCTTCGATCAAGGAGAATCGTTTATTTCAGATTCTAGAGGCTCAAGTCGCAAATGAGGGCGAGGTGGAGCAACTCCAGGCATTTTCCAAGCTTGCTGAGACTTGTCTTAGAATGAAGGGTGAAGAAAGGCCTTCGATGAAAGAAGTGGCAGTGGAACTCGAGCGGTTGAGAAAGTTTCATGAGCATCCATGGGTTAAACGAAACCATGAAGAGAACGAGAGCTTGCTGAATGAACCAGCCTATGGGTTTGCTAGCAATGGAGTTGAGAGCTCTCAGAACATAACTGCTACAAGTATTGAGCTAGGATCATATGGCTCATCTTCTACACTCTAA 2043 0.4342 MVLQLWLHLIILLWVTTSALCSDTKPECQEKCGNVSVPYPFGFGDSKCFRDEGFVLFCNGTVLSVDEDHNIPVHDISLNGQMRINVYVSNDCYDESGVLSSQFYTWITLGDRPYRFSVTRNKFTAIGCDTLAYVTDYDGEVFTSGCVSICNNNEHVEDSCSGIGCCQTFIPENLQAYNVTFYSFYNHNNSWEFNPCSYAFLVDKDWFNFSASYLKDFQYERVPVVLDWVILNQTCEEAVKNTSTYACHNNSNCSNSASGGGGGYLCNCLEGYKGNPYLPQGCQDIDECANPSEYPCNGTCINTPGNYSCICPRGAHGDGKDSCVKNENKFSVVPVSIVIILGVFTLFAGSYLLHEALKKRKLIKLREKFFQKNGGLLLHQQRAKIFTAEELEEATNHYDVSQIVGRGGYGTVYRGMLTDQRIVAIKKSRMVDESLMVDESQIQQFVNEVCILSQINHRNVVKLLGCCLETKVPMLVYEFVSHGTLSQHIHKEGRHTPLMSWENRLRVAAETAEALAYLHSAAYPPIIHRDVKSTNILLDENNTAKELLTGKKPISSGRSQEEKNLVKYFISSIKENRLFQILEAQVANEGEVEQLQAFSKLAETCLRMKGEERPSMKEVAVELERLRKFHEHPWVKRNHEENESLLNEPAYGFASNGVESSQNITATSIELGSYGSSSTL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00529 680 FunFam Fibrillin 2 283 323 - -
Eupl08g00529 680 Pfam Protein kinase domain 398 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00529 680 ProSiteProfiles EGF-like domain profile. 284 324 IPR000742 -
Eupl08g00529 680 Gene3D Phosphorylase Kinase; domain 1 371 479 - -
Eupl08g00529 680 Gene3D Laminin 287 323 - -
Eupl08g00529 680 FunFam Wall-associated receptor kinase 2 233 282 - -
Eupl08g00529 680 ProSitePatterns Protein kinases ATP-binding region signature. 404 427 IPR017441 GO:0005524
Eupl08g00529 680 Pfam Wall-associated receptor kinase galacturonan-binding 28 84 IPR025287 GO:0030247
Eupl08g00529 680 Pfam Wall-associated kinase 158 268 IPR013695 GO:0004674|GO:0016020
Eupl08g00529 680 CDD EGF_CA 284 318 - -
Eupl08g00529 680 SMART serkin_6 398 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00529 680 Gene3D Transferase(Phosphotransferase) domain 1 480 545 - -
Eupl08g00529 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Eupl08g00529 680 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 300 311 IPR000152 -
Eupl08g00529 680 SUPERFAMILY Growth factor receptor domain 243 325 IPR009030 -
Eupl08g00529 680 ProSitePatterns Calcium-binding EGF-like domain signature. 284 309 IPR018097 GO:0005509
Eupl08g00529 680 SMART egf_5 287 324 IPR000742 -
Eupl08g00529 680 SMART egf_5 234 283 IPR000742 -
Eupl08g00529 680 SMART egfca_6 284 324 IPR001881 GO:0005509
Eupl08g00529 680 SUPERFAMILY Protein kinase-like (PK-like) 384 643 IPR011009 -
Eupl08g00529 680 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 546 635 IPR045274 GO:0007166
Eupl08g00529 680 Gene3D Transferase(Phosphotransferase) domain 1 546 649 - -
Eupl08g00529 680 FunFam Wall-associated receptor kinase 2 366 479 - -
Eupl08g00529 680 ProSiteProfiles Protein kinase domain profile. 398 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00529 680 Gene3D Laminin 240 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00529 Eupl-Chr8 9543815 9548355 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00529 2 672 Receptor kinase-like Gene Family AT1G21230 39.257 7.10e-155 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl08g00529 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00529 - - msin:131223944 661.373