Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00525 ATGGTTGTGCAATTGTTGTTTCAGCTCTTAATCATAGTAGGGGTAACAACAGCGTCGGCATCATCATTCAATATTACAAAGCCCGGGTGCCAAGAAAGATGTGGGAAAGTTAACATTCCATACCCATTCGGTGTTGGAAATTCATCAAACTGTTTCAGGGACGAAGGATTCAAGTTCTATTGCAATGATACGGGACTGTTTACAACCAAAGAGAGTAACATACGCGTGGATTATATATCGTTAAAAGGCCAAATGCAAGTAAGCCTTGCTGTTTCCTTCGCCTGTTACAAAGAGTCAGGAAAAGCATTCAGGTGGTCAAACAAAAGGGTCGTATTTTCGAAAAATAGACCCTACAGGTTTTCGGATACCCGAACCAAGTTCACAGTTGTTGGTTGCGACACAGCAGCTTTTGTGGGGGACCGCGAGCGCAAGGTCTTCGAAACCGGCTGCATATCGGGTTGTACCAATTTCACAAGTATTACAAACGGTTCTTGCTCTGGCAACGGCTGCTGCCAGGTCTCCATCCCGAAGAATATCAAGAGAATACGAATGCGTTTGGATAGCAGCAGGAGTAACGATTCTTTGGACTTCAATAAATGCAGCTACGCCTTCCTGGTGGACCAAGAGAGATTCAATTTCTCTGCATCGTATCTTAACGGTTTTCCAAATAGAACTACTCCGGTAATGCTCGACTGGGTGGTTGGAAACGAGACATGCGAAGATGCTAAAAGGAACCGGACTAGTTATGCATGCGGCGACAACACCGACTGCTACAACTCCAGCCTCGGATATCTGTGCAAATGTTCAGAAGGTTACCTAGGGAACCCTTATCTCCTCCAGGGATGCCAAGATATTGATGAGTGCGCAGATGGAAAAACTTGCAAATGGGATTGTGTCAATGCGCCTGGCACTCACTATTGCAATTGCCCCCCCGGCATGCGTGGTGATGGTAATTATTGCTCTAACAAATTTCCGGCGATTACAGTTTCTATAGTTATTATGTTCGGCACTTTCACGCTATTTGCTGGTAGTTACTTGCTCTATGAGGCACTCATGAAAAGGAAGCTCATCAGACTTAAAGAGATTTTCTTTCAAAAAAATGGAGGTTTGTTATTACAACAACAAAGAGCTGAGATATTCACTGCAAATGAGCTCGAAAATGCATCGAACAATTACAATGAAAATCAAATCATTGGGCGAGGAGGCTATGGTACAGTTTACAAAGGAATTTTAGCAGATCAAAGAATAGTTGCAATTAAGAAGTCGAAGATAGTGGATGAGAGCCAAATTGAGCAATTTATAAATGAGGTTGGCATTCTTTCACAGATCAACCACCGGAATGTTGTTAAGCTCTTGGGTTGCTGTTTAGAGACTAAAGTTCCTGTGTTAGTTTATGAATTTGTCTCCCATGGAACCCTCTCCGAACATATCCACAGTGAGGGACATACACCCTTAATGTCATGGGAAAACCGTTTAAGAGTTGCTGCTGAAACTGCTGGGGCACTTGCTTATTTGCATTCTGCAGCTTACCCACCAATCATCCATAGAGATGTGAAATCTACCAACATACTCTTAGATGAAAATAACACCGCGAAAGTATCTGATTTCGGTGCTTCAATGTTGGTTCCGCTAGATCAAACCAAAGTGGCTACATTCGTGCAAGGGACACTCGGATACTTAGACCCAGAATATTTTCAGACAGGCGACTTAACCGTCAAGAGCGATGTTTATAGCTTTGGGGTAGTTCTTTTGGAGCTCTTGACAGGAAAAAAGCCACTTTCTTTTGGGAGATCACAAGAGAAAAACTTAGTAAAGTACTTCATTTCTTCAATGAAAGAGAATAGTCTATTTCAAATTCTAGAGGCACAAGTTGCAAATGAGGGTGAGGTGGAGCAGCTCCAGGCAGTTGCCAAGCTTGCTGAGAGTTGTCTTAGAATGAAGGGTGAAGAGAGGCCTTCGATGAAAGAAGTGGCAGTGGAACTCGAGCGGTTGAGGAAGTTTCGTGAGCATCCATGGGTTAAACAAAACCATGAAGAGATCGAGAGCTTGCTGGTTGAACCAGCATATGGGTTTGCTAGCAATGGAACTGAGAGCTCTCAGAACATAACTGCTACATCTATTGAGCTAGGATCATATGGCTCATCTTCTACACTCTAA 2157 0.4321 MVVQLLFQLLIIVGVTTASASSFNITKPGCQERCGKVNIPYPFGVGNSSNCFRDEGFKFYCNDTGLFTTKESNIRVDYISLKGQMQVSLAVSFACYKESGKAFRWSNKRVVFSKNRPYRFSDTRTKFTVVGCDTAAFVGDRERKVFETGCISGCTNFTSITNGSCSGNGCCQVSIPKNIKRIRMRLDSSRSNDSLDFNKCSYAFLVDQERFNFSASYLNGFPNRTTPVMLDWVVGNETCEDAKRNRTSYACGDNTDCYNSSLGYLCKCSEGYLGNPYLLQGCQDIDECADGKTCKWDCVNAPGTHYCNCPPGMRGDGNYCSNKFPAITVSIVIMFGTFTLFAGSYLLYEALMKRKLIRLKEIFFQKNGGLLLQQQRAEIFTANELENASNNYNENQIIGRGGYGTVYKGILADQRIVAIKKSKIVDESQIEQFINEVGILSQINHRNVVKLLGCCLETKVPVLVYEFVSHGTLSEHIHSEGHTPLMSWENRLRVAAETAGALAYLHSAAYPPIIHRDVKSTNILLDENNTAKVSDFGASMLVPLDQTKVATFVQGTLGYLDPEYFQTGDLTVKSDVYSFGVVLLELLTGKKPLSFGRSQEKNLVKYFISSMKENSLFQILEAQVANEGEVEQLQAVAKLAESCLRMKGEERPSMKEVAVELERLRKFREHPWVKQNHEEIESLLVEPAYGFASNGTESSQNITATSIELGSYGSSSTL* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00525 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Eupl08g00525 718 Gene3D Laminin 236 286 - -
Eupl08g00525 718 Gene3D Phosphorylase Kinase; domain 1 366 467 - -
Eupl08g00525 718 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 673 IPR045274 GO:0007166
Eupl08g00525 718 CDD STKc_IRAK 398 664 - -
Eupl08g00525 718 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
Eupl08g00525 718 SUPERFAMILY Protein kinase-like (PK-like) 372 671 IPR011009 -
Eupl08g00525 718 CDD EGF_CA 284 316 - -
Eupl08g00525 718 SMART egfca_6 239 283 IPR001881 GO:0005509
Eupl08g00525 718 SMART egfca_6 284 321 IPR001881 GO:0005509
Eupl08g00525 718 Pfam Calcium-binding EGF domain 284 318 IPR001881 GO:0005509
Eupl08g00525 718 Gene3D Transferase(Phosphotransferase) domain 1 468 685 - -
Eupl08g00525 718 Pfam Wall-associated kinase 163 269 IPR013695 GO:0004674|GO:0016020
Eupl08g00525 718 FunFam Wall-associated receptor kinase 2 364 467 - -
Eupl08g00525 718 SMART serkin_6 392 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00525 718 Pfam Protein kinase domain 392 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00525 718 ProSiteProfiles Protein kinase domain profile. 392 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00525 718 FunFam Wall-associated receptor kinase 2 468 683 - -
Eupl08g00525 718 Gene3D Laminin 287 323 - -
Eupl08g00525 718 ProSitePatterns Protein kinases ATP-binding region signature. 398 421 IPR017441 GO:0005524
Eupl08g00525 718 SMART egf_5 238 283 IPR000742 -
Eupl08g00525 718 SMART egf_5 287 321 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00525 Eupl-Chr8 9342347 9353911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00525 27 710 Receptor kinase-like Gene Family AT1G21230 45.628 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl08g00525 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00525 - - msin:131223944 745.347