Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00521 ATGCGAAGCAACGATTCATCGTACGGAAGTCGGGACCCTAGCTCCCACGGCAGGAGAACGCCGGACCACTCGGAATTCTCACAGAGCTCCGCTTATTCCAAGGCCTCTACCAGTCGGGAGACTGTCCCCGCCCGGAACCCGGTGAAGATCGCGGCCAGATACTTTGCGGGAACAATCGTTTCGTGCTTCGCTCCTCCGGAGACCAAATTGTCTTCTTCTGGAGACGATTTTGATGAATTCAGGGCTCCTTCCGTTGCGTCAGATCCTTCGGGGGCTGGTAGTGAAAGGAGGCGTGGTTCCAGCCGAGGGATTTATAGCAGTTCATACAATTCAACCCAGACGACTGAACCTGGGGGTGTGAAATTCACTATGAAGGAGATATACAAAGCTACCTGGAATTTCTCCCCCTCCTTCAAGATTGGACAAGGTGGGTTTGGGACAGTCTACAAGGGGAGACTTGAAGATGGCACCCCAGTCGCAGTTAAACGTGCAAAGAAGAGTGTTTATGATAAGCATTTGAGTGTGGAATTCCAAAGTGAGATCGGGACATTGGCACGAGTTGAGCATTTGAATTTGGTAAGGTTTTATGGATTTTTGGAGCACGGGGACGAGAGGATCATTGTTGTTGAGTATGTCCCCAATGGATCCCTCAGAGAGCACTTGGATTGCTTGGATGGTAACACACTCGACCTTGCTGCACGGTTAGATATTGCGATTGATGTCGCGCATGCAATTACCTATCTCCATATGTATACAGATCACCCTATCATCCACAGAGACATTAAATCTTCAAACATCCTCCTCACCGAAACCCTTCGAGCCAAGGTGGCCGACTTTGGGTTTGCTAGATTGGCCGCTGACACTGATTCGGGAGCCACCCATGTATCCACACAAGTTAAAGGAACGGCTGGGTACTTGGATCCAGAGTACCTAAGAACCTATCAACTGACCGAGAAGAGTGATGTTTACTCTTTTGGTGTGTTGTTGGTGGAACTAGTCTCAGGCAGGCGACCTATTGAACCCAAAAGGGAGCTCAAGGAACGGATAACTGCAAGATGGGCAATAAAGAAATTTACAGATGGGGAAGCAATTCAAACGTTGGATCCAAGGTTACCACAGACTTCAGCAACTAACTCAGCATTAGAAAAGATTCTCGAGCTGGCCTTACAATGCTTGGCTCCAACCAGACAGAACCGGCCAAGCATGAGGAGGTGTGCGGAGATCCTGTGGAGCATCCGAAAGGATTACAGAGAGCTCTCAGCTTCAGACTTTCGCTCACTATCATCTCTTTCTCAGAGGAGTGCTTCTATTAGAGAAGAGTAA 1323 0.489 MRSNDSSYGSRDPSSHGRRTPDHSEFSQSSAYSKASTSRETVPARNPVKIAARYFAGTIVSCFAPPETKLSSSGDDFDEFRAPSVASDPSGAGSERRRGSSRGIYSSSYNSTQTTEPGGVKFTMKEIYKATWNFSPSFKIGQGGFGTVYKGRLEDGTPVAVKRAKKSVYDKHLSVEFQSEIGTLARVEHLNLVRFYGFLEHGDERIIVVEYVPNGSLREHLDCLDGNTLDLAARLDIAIDVAHAITYLHMYTDHPIIHRDIKSSNILLTETLRAKVADFGFARLAADTDSGATHVSTQVKGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVSGRRPIEPKRELKERITARWAIKKFTDGEAIQTLDPRLPQTSATNSALEKILELALQCLAPTRQNRPSMRRCAEILWSIRKDYRELSASDFRSLSSLSQRSASIREE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00521 440 PANTHER OS01G0750732 PROTEIN 60 423 - -
Eupl08g00521 440 Gene3D Transferase(Phosphotransferase) domain 1 212 432 - -
Eupl08g00521 440 Pfam Protein kinase domain 139 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00521 440 MobiDBLite consensus disorder prediction 100 117 - -
Eupl08g00521 440 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00521 440 SUPERFAMILY Protein kinase-like (PK-like) 109 412 IPR011009 -
Eupl08g00521 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Eupl08g00521 440 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Eupl08g00521 440 Gene3D Phosphorylase Kinase; domain 1 97 211 - -
Eupl08g00521 440 MobiDBLite consensus disorder prediction 72 117 - -
Eupl08g00521 440 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 423 - -
Eupl08g00521 440 MobiDBLite consensus disorder prediction 1 42 - -
Eupl08g00521 440 MobiDBLite consensus disorder prediction 24 42 - -
Eupl08g00521 440 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 94 211 - -
Eupl08g00521 440 CDD STKc_IRAK 140 409 - -
Eupl08g00521 440 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00521 Eupl-Chr8 9274190 9277240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00521 122 402 Receptor kinase-like Gene Family AT1G79620 47.331 1.10e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Eupl08g00521 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00521 - - nnu:104610644 639.802