Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00517 ATGGCATCTGGGTTTCCCGGTGGTGGCGATTTCTATAGCTCCGCCGGGATTGGTGGCGGAGGATCGTCCATGATCAACAATGTTCAAGTTCAGTATCGGTCACAACTCGGTGGAATTCTCGTTGACTCGTCTTCTCCAATCGTTCCTCCTCGACGAAACGATTTACTCGCCAAACGATCTCTTGCAGATCTTGAACAACAACAAGGGTTTCTTCTCAGGTCGGTGAAACAGAGGAGTTACCAGCACCAGACCTCTCCCATCTCTCCTCTTTCTCCTGTTGAGTTTTCCCCCATGGAAAGGTACGGGTACGGGTACGGACAAGGACATGTAAGAGGACACGGGCTTCCCCTTGTTCAACAGCTACGGCCACAATCAATTATTCCCAATCCCAACACCCAAAACAATAGTCTTTGTAACCCCAGTTTGTCAAATCTCTCGTTCTCTCAAATTGTGCAGAACCGAGCGGTGTTTCCGGAATCGGAGCCTGATTTGAAGAACAAAATGAAGAATCAGCTTGAAGAGCTGGAGAAACAGCTCTTAGATGATAACGAAGGAGAGGACGGAGACGCTGCTTCTGTAATCACGAGTGAGTGGACCGAAACTATGCAGAATCTGATAAACCCAAATCAAAAAACCCTTTCTCCTTCTCCTACTTCATCTTCTTCGTCATCTTCATCTTCCTTATCTTCGGTGTCACCGAAGCAGTCTTTAATAGATGCCGCTACTGCAATCTCCGAAGGAAATATTGATGCAGCGATGTCGACTCTTGAGCATTTGAAGCTAATATCGAACACTCGAGGCGATCCGGAGCAGAGATTGACGGCCTATATGGTTTCTGCTCTCCGGTCCCGCATGAACCCTATGGAGAATCCTCCTCCGCAGGTGATGGAGCTCTCCAGCAGTGATCATAGGGACGCAACCCAGATGCTGTACGAAGCTTCTCCTTGTTTCGAGCTTGGATTCATGGCTGCTAACCTCGCAATCCTTGAAGCAACCAGAGACCAACCAAACAATGTTCATATCGTGGATTTCGATATCGGACATGGCAGCCAGTATATGACCCTGTTACACGCTCTTGCAGAGCGGCTAACCGGGAGGACTGGGATCGTTAGAATCACCACTGTTACCGATCCAACGAACCGGAACGAAGATGGGTTGCGAGGTGTTGGGGATCGGCTGAGAAAAATCGCGAAGCAAGTTGGGGTCGAGCTTAGATTCAATGTTGTGAGCAAGAAGTTGTCTGATCTCAATCGGGTGACGTTAGAGTGCGAGCCCAACGAAGCATTAGTGGTGAATTTCGCGTTCCGGCTGTACAAAATGCCCGACGAGAGCGTGTCAACGGAGAACCCACGCGACGAATTGCTAAGAGTCGTGAAGGGTTTGACACCGCGAATCGTCACGATGGTAGAGCAAGAGATGAACTGCAACACGGCTCCGTTCGTGGCGAGGCTGAACGAAGCCTGCGACTACTACCGTGCTCTGTTTGACTCGCTTGACTCGACCATGACTCGTGATTCGAATGAGCGAGTTAAAATAGAGAAATGCTTAGCAAGGAAATTGGTTAACTCAGTAGCGTGCGAGGGGAGGGATCGCGTGGAGCGGTGTGAAGTTTTCGGTAAGTGGCGGGCCCGGATGGGAATGGCTGGGTTCGAGTCAAGACCATTGGGTCAACACGTTGGTGAGTTTATTCGGGTTCGACTCGGTTCGACTGACCCAACGATCCCGAGTTTCACAATGAAAGAAGAAGCCGGAGGGATCTGCCTTGGTTGGACGGATCGGGTACTCACCGTTGCATCTGCCTGGCGTTAA 1809 0.5019 MASGFPGGGDFYSSAGIGGGGSSMINNVQVQYRSQLGGILVDSSSPIVPPRRNDLLAKRSLADLEQQQGFLLRSVKQRSYQHQTSPISPLSPVEFSPMERYGYGYGQGHVRGHGLPLVQQLRPQSIIPNPNTQNNSLCNPSLSNLSFSQIVQNRAVFPESEPDLKNKMKNQLEELEKQLLDDNEGEDGDAASVITSEWTETMQNLINPNQKTLSPSPTSSSSSSSSSLSSVSPKQSLIDAATAISEGNIDAAMSTLEHLKLISNTRGDPEQRLTAYMVSALRSRMNPMENPPPQVMELSSSDHRDATQMLYEASPCFELGFMAANLAILEATRDQPNNVHIVDFDIGHGSQYMTLLHALAERLTGRTGIVRITTVTDPTNRNEDGLRGVGDRLRKIAKQVGVELRFNVVSKKLSDLNRVTLECEPNEALVVNFAFRLYKMPDESVSTENPRDELLRVVKGLTPRIVTMVEQEMNCNTAPFVARLNEACDYYRALFDSLDSTMTRDSNERVKIEKCLARKLVNSVACEGRDRVERCEVFGKWRARMGMAGFESRPLGQHVGEFIRVRLGSTDPTIPSFTMKEEAGGICLGWTDRVLTVASAWR* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00517 602 Pfam GRAS domain family 235 602 IPR005202 -
Eupl08g00517 602 ProSiteProfiles GRAS family profile. 224 602 IPR005202 -
Eupl08g00517 602 Coils Coil 165 185 - -
Eupl08g00517 602 MobiDBLite consensus disorder prediction 207 232 - -
Eupl08g00517 602 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 210 596 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00517 Eupl-Chr8 9217103 9219269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00517 26 602 GRAS Transcription Factor Family AT5G52510 42.357 5.09e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl08g00517 GRAS 6.5e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00517 - - ming:122058148 688.723