Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00502 ATGTCTGCTCGTGAATCTCGACAAGAGAAACCCAGCAGAAACCTGGAGTCTCCTGGGTTTTGCTACTCTGATATCTCGTCTACACATCTCGTGATGAACCAGATGCAAAGCTTCGAATCCAACCCAGAGCTTTTCAACTTGACTACAGGCATGGAGATGCTAGATTTCCCATCTAAGACTCGAGATGCTAACTCGGTTATGTGGAAAGGTTTCTTCAGCAAACCCGGCAACCATGGCGGTTCGTCTTCTTCGAAGACGATCAATGAACCCACAAACGATTTCTATCAAAATGAGTTCAATAAACCCGATTTCTCAACTGGTTTCTCTGAAACAACGAATGAGAATCTGATGGTTGCACCCGACTCATTGCTCGTCAACGATTCATCTTTGCGCTGTGTTTTTCCTTGTGAAGGGAACGAGCGGCCGAGTCAAGGACTCTCACTCACTCTGAGTTCAAACAGGCCTTCTGGTATCGGGTTACAATCGTTCGAGGTGAGAGATACGACGACTCATCAAGATCATCATCAACAACAAGATGGGTTCTTTGGAAAATCTGCAAATTTTCAATACCAACAACAGCAAATCCTGCAAGATGGGTTTGTAGGAAAAGCTGCAAATCTTCATCAAACCAACTCACAGCTCAAGAATTCGAAGTATTTAACTCCTGCTCAGGAGCTTCTGAACGAGTTCTGTAACGTTGGAACAAAGCAAACTGATCCACCAAAGCAGAAGTCCTATAAGATCAAAAAATTGGATAACGAAAATGGTACTGGGTCTTCAAGAAAACAATCATCTCTGCACTCTCTAGACCCCCTTGAATTACAGAAACTAAAAGCCAAGTTGCTTTCCATGCTTGAAGAGGTGGATAGAAGATACAGGCAATACCATGATCAGATGAACGCAGTAGTGTCATCATTTGAAGCGGTGACCGGGACCGGCGCTGCGAAGGTCTACTCGGCGATGGCATCGAAGGCCATGTCTAGACATTTTAGGTGTCTAAGAGATGGAATTGTAGAACAAATTAAGACTATAAAGAAGGCAATAGGGGAGAAGGATCCAGTTGCACCAGGGATGACTAAAGGTGAGACACCAAGGCTTCGGATTCTCGACCAAACACTTAGACAACAGAGAGCTTTTCAGCAGATGAACATGATGGAGAGCCATCCATGGAGACCCCAAAGAGGCCTCCCTGATCGATCGGTGTCGATTCTTCGCGCTTGGCTCTTCGAACACTTCCTTCACCCGTATCCAAGCGATGTGGATAAACACATTTTAGCCCGCCAAACAGGACTCTCAAGAGGCCAGGTACGTTCCATGCAATCTCAATGGGTACCTAGCTATAACAAAAACATGGGTCGGCTTATTTTGACACTTTGTGCAGCCTACATGGAGAAGAGTTAA 1401 0.4518 MSARESRQEKPSRNLESPGFCYSDISSTHLVMNQMQSFESNPELFNLTTGMEMLDFPSKTRDANSVMWKGFFSKPGNHGGSSSSKTINEPTNDFYQNEFNKPDFSTGFSETTNENLMVAPDSLLVNDSSLRCVFPCEGNERPSQGLSLTLSSNRPSGIGLQSFEVRDTTTHQDHHQQQDGFFGKSANFQYQQQQILQDGFVGKAANLHQTNSQLKNSKYLTPAQELLNEFCNVGTKQTDPPKQKSYKIKKLDNENGTGSSRKQSSLHSLDPLELQKLKAKLLSMLEEVDRRYRQYHDQMNAVVSSFEAVTGTGAAKVYSAMASKAMSRHFRCLRDGIVEQIKTIKKAIGEKDPVAPGMTKGETPRLRILDQTLRQQRAFQQMNMMESHPWRPQRGLPDRSVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRGQVRSMQSQWVPSYNKNMGRLILTLCAAYMEKS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00502 466 Gene3D - 396 441 - -
Eupl08g00502 466 SMART prehox3 208 339 IPR006563 -
Eupl08g00502 466 MobiDBLite consensus disorder prediction 1 20 - -
Eupl08g00502 466 MobiDBLite consensus disorder prediction 242 256 - -
Eupl08g00502 466 Pfam Associated with HOX 214 337 IPR006563 -
Eupl08g00502 466 CDD homeodomain 390 437 IPR001356 GO:0003677
Eupl08g00502 466 MobiDBLite consensus disorder prediction 234 269 - -
Eupl08g00502 466 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 159 437 - -
Eupl08g00502 466 Pfam Homeobox KN domain 407 436 IPR008422 GO:0003677|GO:0006355
Eupl08g00502 466 SUPERFAMILY Homeodomain-like 383 437 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00502 Eupl-Chr8 9020601 9022300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00502 112 436 Homeobox Transcription Factor Family AT5G41410 46.961 2.86e-86 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00502 - - nnu:104595992 620.542