Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00494 ATGATGGCTGGAGGTAGATTTTCCATTTTGAAGTCATTTTATACTGGTGTTAATCATGCCTCACAGATGCGATTTATTCGGTCATATAGTTCTTGCATGAACTTTACAAACTTAACCGACCGGATTCTTCCAGCGCGAGCACATTTGAATGCAAATCATAAGAACCCGACAAGCGTTTCGAGGCTTCTGGGCAATAAAGTGGATACCCAGTTCAGAATTTTGCCTTTTCAATCTCTTGTAGATAATCGGCATTACAGAAATGAACCCATCTCAGCTTTTTCTCATAGATGTCGACAGAACAGTGGGTTATCAACATTGCATTCTCAGGCTACTGCTTTTCCTATTTGTGTTAGCAGTATGTCCAGTTGTCGAGCATATTCATCGTTTTTTGGTAGCAAAGGGGATGGTCAGAAGGATCCGGATGTGTCGGTTGCTTCCGTTGCAAGTGAATCGAATGTCAATAACACTGATGTAGTTGGAAGCGATTGGGCTGATAGTTTGAAGAATGCTTGGCATTATGCTGTAGATGCTGCAGCTTATACGGGGCAAAAGGCTAAAGAGGCATCTGATGAACTCACTCCTTATGTTCAACAGTTGCTTGATTCACATCCGTATCTAAGAAATGTGATCGTTCCTCTTGGTGGGACTTTGACTGCTACATTATTGGCTTGGCTGGTAATGCCGAGGTTTTTCAGAAAACTTCACAAGTACTCAATGCAAGGTCCTGCTGCATTACTATCCGGAAGCTTACATCAAGAACAAGTTCCATATGAGAAAAGCTTTTGGAGTGCATTGGAAGACCCCGTGCGATATCTAATCACCTTCATGGCATTTTCACAATTAGGTGTGATCATTGCGCCTACCACAATTGCATCTCAATACATTGCTCAAGCTTGGAGGGGTGCAGTTATCATTTCATTTGTATGGTTTCTCCATAGGTGGAAGACGAATGTATTTACTCGTGCTCTGACTGTTCAGAATGTAGCTGGGTTTGATCGAGATAAGTTGCTAGCTCTAGATAAACTCTCATCTGTGGGTCTGTTTGTGTTGGGATTGATGGCTTCAGCCGAGGCATGTGGTGTGGCTGTGCAATCTGTTTTGACTGTTGGTGGTATAGGAGGAGTGGCTACTGCTTTTGCTGCTAGAGACATCCTTGGAAATGTGCTCAGTGGATTGTCCATGCAGTTTTCAAGGCCCTTTTCGTTGGGAGATACCATAAAAGCTGGATCTATAGAAGGTCAAGTGGTAGAAATGGGACTTACTACCACGTCATTATTGAATGCCGAGAAATTTCCTGTCATAGTTCCAAATTCATTATTTTCTAGTCAGGTGATTGTGAATAAATCACGTGCCCAATGGCGTGCTATGGTGACCAGAATTCCTCTGCGGCTTGATAACTTGGAAAAGATTCCCCAGATCTCAGAGGATATAAAGTCCATGCTAAGATCAAATGCAAAAATTTTGTTGGGAAAGGAGGCTCCTTACTGTTTCCTTTCTCGAATAGAAAATTCATATGCAGAACTGACTGTTGGATGCAATCTCAAACATATGAGCAAAGAAGAGTTATACGCAACAGAACAAGATGTTCTGCTACAGGCAGCCCAGATAATTAAGAAGCATGGTGCTGCTCTGGGCAGCATGCTACAAGTTTGA 1653 0.4247 MMAGGRFSILKSFYTGVNHASQMRFIRSYSSCMNFTNLTDRILPARAHLNANHKNPTSVSRLLGNKVDTQFRILPFQSLVDNRHYRNEPISAFSHRCRQNSGLSTLHSQATAFPICVSSMSSCRAYSSFFGSKGDGQKDPDVSVASVASESNVNNTDVVGSDWADSLKNAWHYAVDAAAYTGQKAKEASDELTPYVQQLLDSHPYLRNVIVPLGGTLTATLLAWLVMPRFFRKLHKYSMQGPAALLSGSLHQEQVPYEKSFWSALEDPVRYLITFMAFSQLGVIIAPTTIASQYIAQAWRGAVIISFVWFLHRWKTNVFTRALTVQNVAGFDRDKLLALDKLSSVGLFVLGLMASAEACGVAVQSVLTVGGIGGVATAFAARDILGNVLSGLSMQFSRPFSLGDTIKAGSIEGQVVEMGLTTTSLLNAEKFPVIVPNSLFSSQVIVNKSRAQWRAMVTRIPLRLDNLEKIPQISEDIKSMLRSNAKILLGKEAPYCFLSRIENSYAELTVGCNLKHMSKEELYATEQDVLLQAAQIIKKHGAALGSMLQV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00494 550 Pfam Mechanosensitive ion channel 341 542 IPR006685 GO:0016020|GO:0055085
Eupl08g00494 550 Gene3D - 294 398 - -
Eupl08g00494 550 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 163 546 - -
Eupl08g00494 550 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 297 382 IPR011014 GO:0016020
Eupl08g00494 550 Gene3D - 399 447 IPR023408 -
Eupl08g00494 550 SUPERFAMILY Sm-like ribonucleoproteins 383 448 IPR010920 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00494 163 546 Mechanosensitive Ion Channel Family AT4G00290 68.229 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00494 K22047 - nnu:104611524 755.747