Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00474 ATGACCGATCTCACTCCCTTAGTCAAGTTCCCTCTATTTCTTTCTCTCGCTCTGGAGTCTGGACTCTGGACTTCTCTGCAATTCCACCACCTCAATTTGCCGGAAACAACCACTTTTTCGCCGGCGAAACGATACATCATGGCGGTCTACGACACACTGTTTCTGAATCTGAACAGTGAGCTTTCGAAACCTACTTCCATCTTCGGCCTCCGCTTATGGGTCGTGATTGGAATATGCGTTGGAGCATTCACCATTCTCCTTATCTTCCTCCTTTCCCTCTGCATCACCTCCCGCCGCCGGAAATCCCGTAAATCCGGCGCTTTTCCTGCGAAATTCACTGCCGGAGACTCCACCCCTGTTTTCCCTATGGAGATCCAACCGACCGTCCATGTTGTGCACCCTGTCCCGGAGATCCAGATCGATATAGGGAAGGCAGAGCATCGGGTGGTGTTCTCTGATCAGCTGTCGTCTCAAGCGAGTGGAGAGAGTCGGTCGACTACTGCGACCGAATTGGCTTCGATGGCTGCGGGACCGCCGGAGGTGTTGCATCTGGGGTGGGGGCGTTGGTATACTTTGAGGGAGCTTGAAGAGGCGACAAATGGGTTGGCAGAAGAGAATGTGATCGGAGATGGTGGTTATGGGATCGTTTATCGGGGAGTTTTGCGGGATAACACGCAAGTAGCAGTGAAGAACTTGCTCAATAACAGGGGTCAAGCTGAGAAGGATTTTAAAGTAGAGGTGGAAGCGATTGGGCGTGTTAGACACAAGAATTTAGTCAGGTTGCTCGGATATTGTGTCGAGGGAGCTTACAGGATGCTTGTTTATGAGTATCTAGACAATGGTAATCTCGATCAGTGGCTTCATGGGGATGTAGGGCAAGTCAGCCCTCTAACGTGGGATATTCGAATCAACATTATCCTTGGAACTGCGAAAGGCTTGGCCTACCTTCATGAGGGTCTTGAACCCAAGGTTGTCCATCGAGATGTAAAATCTAGCAATATACTACTCGACCAACAATGGAATCCCAAGATTTCTGATTTTGGGCTTGCTAAGCTCTTATGTACTGAGAAAAGTTACGTGACAACTCGTGTGATGGGAACATTTGGCTATGTAGCACCTGAATATGCTTGCACTGGTATGTTGAATGAGAGGAATGATGTTTATAGCTTTGGAATACTTATCATGGAAATAATTTCTGGGAGGAGCCCTGTTGATTACAGTCGAGCCCCTGAAGAGGTAAATTTGGTGGATTGGTTAAAGACAATGGTTGGAAATCGAAAATCTGAGCAAGTAGTGGATCCTAAGTTGCCTGAAATGCCTTCTTCAAAGGCACTCAAACGGGTTCTTCTGGTTGCTCTCCGATGTGTTGATCCAGAGGCACAAAAAAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGACGACTTGCTATTCCGTGATGAACGTCGGATCGCGCGAGAGACTTCCCATTCCCATCTAGATCATCCTCATACAAATCAGGTTGTTGCAAGATTGGGTGATAAAAGGCTGGTTGATGAGGCCTACGACAGAAGCAAAGGGGAAAGCACTAGCAATCACCACCAGCAAACAAAGTGGAGATGA 1608 0.4807 MTDLTPLVKFPLFLSLALESGLWTSLQFHHLNLPETTTFSPAKRYIMAVYDTLFLNLNSELSKPTSIFGLRLWVVIGICVGAFTILLIFLLSLCITSRRRKSRKSGAFPAKFTAGDSTPVFPMEIQPTVHVVHPVPEIQIDIGKAEHRVVFSDQLSSQASGESRSTTATELASMAAGPPEVLHLGWGRWYTLRELEEATNGLAEENVIGDGGYGIVYRGVLRDNTQVAVKNLLNNRGQAEKDFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYLDNGNLDQWLHGDVGQVSPLTWDIRINIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDQQWNPKISDFGLAKLLCTEKSYVTTRVMGTFGYVAPEYACTGMLNERNDVYSFGILIMEIISGRSPVDYSRAPEEVNLVDWLKTMVGNRKSEQVVDPKLPEMPSSKALKRVLLVALRCVDPEAQKRPKMGHVIHMLEADDLLFRDERRIARETSHSHLDHPHTNQVVARLGDKRLVDEAYDRSKGESTSNHHQQTKWR* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00474 535 SMART serkin_6 202 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00474 535 FunFam Probable serine/threonine-protein kinase At1g01540 182 277 - -
Eupl08g00474 535 ProSiteProfiles Protein kinase domain profile. 202 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00474 535 SUPERFAMILY Protein kinase-like (PK-like) 187 482 IPR011009 -
Eupl08g00474 535 FunFam Putative receptor-like serine/threonine-protein kinase 278 488 - -
Eupl08g00474 535 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Eupl08g00474 535 Gene3D Phosphorylase Kinase; domain 1 176 277 - -
Eupl08g00474 535 PANTHER OS01G0323000 PROTEIN 57 495 - -
Eupl08g00474 535 Gene3D Transferase(Phosphotransferase) domain 1 278 490 - -
Eupl08g00474 535 Pfam Protein tyrosine and serine/threonine kinase 205 473 IPR001245 GO:0004672|GO:0006468
Eupl08g00474 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Eupl08g00474 535 CDD STKc_IRAK 208 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00474 Eupl-Chr8 8583915 8587057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00474 74 534 Trihelix Transcription Factor Family AT5G38560 34.672 5.28e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl08g00474 PK_Tyr_Ser-Thr 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00474 - - nnu:104611517 801.201