Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00469 ATGGCGTCCTCTGCAATTTTACAGTCTTGTTCTTCTTCATTTCATGGTCGATTTCCGGTAGTTTCAGCTCCGGTTTCGACCCAAATTCCGGTCGTAAACCCTAGAAATCGATTTGGGTTATCGGTGAAAGCTTCTACGGGGATCGTTTTGGTGGAGAAATCTGAAGCAGTGAAGGTTGAACGTCTCAAAACGACTTATCTGGAGAAAATCGTTCCTTTGCTCAAGGAAGAGTTCTCTTACACAAACATTCATGAGGTCCCTAAGATCGAGAAGATAGTGGTGAACTGTGGAATTGGAGACGCTGCGCAGAATTCCAAGGGTTTGGATGCAGCGATTAAGGATTTGGCGCTCATTACCGGGCAGAGGCCCGTGAAAACCAGAGCAAGGGTGTCCATTGCCACCTTCAAGCTCAGGGAAGGTGAACCTATCGGCATTGCCGTCACACTCAGAGGAAATATGATGTATTCGTTTCTGGATCGGCTCATTAACTTGGGGCTTCCTAGGACAAGGGATTTCCAAGGTGTAAACCCCAACAGCTTCGATGGACACGGGAACTATAGCATAGGAATGCGAGAACAGAGTGTATTCCCAGAGATTAGATATGATGCCCTTGGAAAGCCAAGGGGAATGGATGTCTGCATAACGACTACAGCCAATACAGATAAGGAAGCTCAGAAGCTACTTGCTCTTATGGGGATGCCGTTCAGAGAGGGTGGAGGTCCAACAGTATTGGTGCGCAAGAAGAAGAAAAAGGCTCATCATTTTGAGTCGAAGTCGAAATCAAAGGGACGGAGGTAA 798 0.4699 MASSAILQSCSSSFHGRFPVVSAPVSTQIPVVNPRNRFGLSVKASTGIVLVEKSEAVKVERLKTTYLEKIVPLLKEEFSYTNIHEVPKIEKIVVNCGIGDAAQNSKGLDAAIKDLALITGQRPVKTRARVSIATFKLREGEPIGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGMREQSVFPEIRYDALGKPRGMDVCITTTANTDKEAQKLLALMGMPFREGGGPTVLVRKKKKKAHHFESKSKSKGRR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00469 265 FunFam 50S ribosomal protein L5 58 237 - -
Eupl08g00469 265 SUPERFAMILY RL5-like 61 236 IPR022803 -
Eupl08g00469 265 Hamap 50S ribosomal protein L5 [rplE]. 59 237 IPR020930 GO:0003735|GO:0005840|GO:0006412
Eupl08g00469 265 Pfam ribosomal L5P family C-terminus 142 235 IPR031309 -
Eupl08g00469 265 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 63 238 IPR002132 GO:0003735|GO:0005840|GO:0006412
Eupl08g00469 265 Pfam Ribosomal protein L5 82 138 IPR031310 -
Eupl08g00469 265 Gene3D - 53 237 IPR022803 -
Eupl08g00469 265 ProSitePatterns Ribosomal protein L5 signature. 115 131 IPR020929 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00469 88 214 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 29.134 4.03e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00469 K02931 - vvi:100251632 417.542