Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00467 ATGGTGTCTATAAATCCAAACCCTGCACAAACAGGTTTCTACTTGGACCCGATGGGAATGGCTGCTCTACCTGGACTTGGTTCCTCCGTACCCACATCAACGACATCTTCATCAGAAGATCTAGCGAAGAAGATTCGAAAGCCATACACCATCACCAAATCCAGAGAGAGCTGGACCGAGCAAGAGCACGACAAGTTTCTCGAAGCTCTTCAACTCTTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAGACAGTTATCCAGATACGCAGCCATGCACAGAAGTACTTTCTGAAGGTTCAGAAGAATGGGACAAGTGAACATGTACCTCCACCTCGGCCAAAGCGGAAAGCAGCTCATCCATACCCACAAAAAGCATCTAAAAATGTGACAGGGCCGTTTCAATCTTCGTCTGCTCAGCTTGAACCGGGATATGTTCTCAGGCCAGATTCATCATCAATACTTAGGAACTCTGTTACAAGTCCAGCCTTGTCTTCATGGGCTCACAATTCTGCACCACCAGTCAATGCATCACATGTAACAAAAGATGATATGGGATCTGCAGTCCCTACTGTGGTAAATAATTGTTGTAGTAGCACTGAAAGCACTCCAAGGACATGGCCAACTTGCGAAACAACTGATCGAGGGAATCACGGCCCACCACTGAGAGTTATGCCTGATTTTGCTCAAGTGTACAGCTTCATTGGCAGTGTCTTTGATCCAAACACCAGTGGTCACTTGCAGAAACTAAAGAAGATGGATCCAATTGATGTTGAAACAGTGTTGTTGTTGATGAGAAACCTATCTATCAATTTATCAAGCCCTGATTTTGAGGATCATAGAAGGTTGCTCTCATCTTATGATGTTGACTCTGAGAAGGGTAAATCTGGTGGTGCAAATGACGCCCGTCATGCTGATGAATCTGAGAATACGCCTCCTAGCAGGACGAAGGGGAATGACCTGTGA 975 0.4544 MVSINPNPAQTGFYLDPMGMAALPGLGSSVPTSTTSSSEDLAKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNVTGPFQSSSAQLEPGYVLRPDSSSILRNSVTSPALSSWAHNSAPPVNASHVTKDDMGSAVPTVVNNCCSSTESTPRTWPTCETTDRGNHGPPLRVMPDFAQVYSFIGSVFDPNTSGHLQKLKKMDPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDVDSEKGKSGGANDARHADESENTPPSRTKGNDL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00467 324 Gene3D - 58 105 - -
Eupl08g00467 324 CDD SANT 57 100 IPR001005 -
Eupl08g00467 324 MobiDBLite consensus disorder prediction 104 141 - -
Eupl08g00467 324 PANTHER SWI/SNF COMPLEX-RELATED 32 276 - -
Eupl08g00467 324 FunFam protein REVEILLE 6 isoform X1 57 105 - -
Eupl08g00467 324 Pfam Myb-like DNA-binding domain 55 100 IPR001005 -
Eupl08g00467 324 ProSiteProfiles SANT domain profile. 53 106 IPR017884 -
Eupl08g00467 324 SMART sant 54 102 IPR001005 -
Eupl08g00467 324 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Eupl08g00467 324 MobiDBLite consensus disorder prediction 289 316 - -
Eupl08g00467 324 SUPERFAMILY Homeodomain-like 49 105 IPR009057 -
Eupl08g00467 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Eupl08g00467 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Eupl08g00467 324 MobiDBLite consensus disorder prediction 289 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00467 Eupl-Chr8 8494741 8510257 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl08g00467 Myb_DNA-binding 2.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00467 - - ming:122079276 503.827