Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00455 ATGGAGGACGACTGGGATCTCCATGCGGTGGTGAGAGGCTACACTACCACCACCACCACCACCACAACAGCCACTACAATGGACGATCCTTTCTCTTTCTTTGCTCCTTCGAGCTTTGAACAAGAAGACCAATATCTTTGTCTCCCTGATCTCTTTGAAACTAGAACCGATCTTCAAGAACTAGAAGAGCTTTACAAACCCTTCTTCCCCAAGTTCCAACCCATCTCTCCAAAGAGCTTACCCACCTCCGTTGCTCCAGTTCTCACAGGTTTCCAACAGCAGCAGAAGCAGCACCAGCCTCATCGCTCCCTTTCTGGGTCTGCTACTACTACCTCTACTACTGCTCAGTCTCAGACTCCTAGATTGAAAAGAAGGAAGAACCAACAAAAGCGAGTGGTGTGCCAAGTACCCGCCGAGGGTCTTTCTTCCGATATGTGGGCTTGGCGTAAATACGGGCAAAAACCCATCAAGGGCTCTCCATATCCCAGGGGCTATTACAGATGCAGTAGCTCGAAAGGGTGTTTGGCGAGGAAACAAGTAGAGCGGAGCCACTCAGATCCGACGATGTTTATCATAACGTACACGGCGGAGCACAACCATCCTAAGCCTACCCACCGAAACTCCCTCGCCGGCAGCACTCGTCACAAATTTTCTACACCTACACAAGCCACCACCGGCGACGGAGATACACCCACCAGCAAACCTACTTGTTCTTCTCCTTCAACAATGAGTCTCTCTCCAACTACCCCATTAACGGCAGCCATGGAAGACGAGCTTCTACATAGGCCCACCAAAAAAGAAGGCAGAGAAGACGAGGATGAAGAAGTAATCGAAGAGGATGAAGAAGACGAGCTTATCATCCCCGATATGGTGGTAAGCAGCGACGACTTGTTCATGGGTTTAGAAGAACTCATGGAACCCACAAGCGCCACTTCCTCTGCAGCTTCGGCGTTCGACGACTGCTTTTCCGACCATTTCCCGGAAAATTTTCCCTCTCAATGGTCGGCCAACAACACCGCATCCGCCGCCTCCGGCATCTGA 1041 0.5091 MEDDWDLHAVVRGYTTTTTTTTTATTMDDPFSFFAPSSFEQEDQYLCLPDLFETRTDLQELEELYKPFFPKFQPISPKSLPTSVAPVLTGFQQQQKQHQPHRSLSGSATTTSTTAQSQTPRLKRRKNQQKRVVCQVPAEGLSSDMWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERSHSDPTMFIITYTAEHNHPKPTHRNSLAGSTRHKFSTPTQATTGDGDTPTSKPTCSSPSTMSLSPTTPLTAAMEDELLHRPTKKEGREDEDEEVIEEDEEDELIIPDMVVSSDDLFMGLEELMEPTSATSSAASAFDDCFSDHFPENFPSQWSANNTASAASGI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00455 346 SMART WRKY_cls 142 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00455 346 MobiDBLite consensus disorder prediction 199 248 - -
Eupl08g00455 346 SUPERFAMILY WRKY DNA-binding domain 140 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl08g00455 346 Gene3D WRKY domain 125 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl08g00455 346 MobiDBLite consensus disorder prediction 91 122 - -
Eupl08g00455 346 MobiDBLite consensus disorder prediction 205 248 - -
Eupl08g00455 346 MobiDBLite consensus disorder prediction 260 280 - -
Eupl08g00455 346 MobiDBLite consensus disorder prediction 91 132 - -
Eupl08g00455 346 FunFam WRKY transcription factor 22 125 196 - -
Eupl08g00455 346 Pfam WRKY DNA -binding domain 144 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00455 346 ProSiteProfiles WRKY domain profile. 137 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00455 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 307 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00455 Eupl-Chr8 8258414 8260363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00455 1 346 WRKY Transcription Factor Family AT4G01250 43.020 1.16e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl08g00455 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00455 K13425 - nnu:104600229 381.719