Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00449 ATGGCGCCTGATCTCGAAAAGAGGGCTAAAGAGGCCTTCGTCGACGATAATTTCGAGCTCGCAGTCGAACTCTACACGCAGGCCATCGACATGGACCCTAAGAATGCAGATCTGTTCGCCGATCGCGCTCAAGCCAATATCAAGCTCAAGAGCTATACCGAGGCTGTTGCTGACGCAAACAAAGCAATTGAATTGGATCCTTCAATGGCTAAAGCGTACTTACGTAAAGGCACTGCGTGTATTAAGCTGGAGGAATATCAGACTGCGAAGGCAGCCCTTGAAGCAGGTGCTTCTTTGCCCCCTGGTGATTCAAGATTCACCAATTTGATCAAAGAATGTGATGCGCTCATTGCAGAGGAAACTAGTGATTTACCAAAGGAAGCGACGCACGGTGCCCCACCGAGCGATGTGTCTCCGTCTGTTGAATCTCATTCATCACATGTAACTACAGAACATGTAAATGATGCTGAGCCAGGGCATGACATATCTCATCACCCAACATTGGTAACTTCGGCTACACCAAAGTACAGGCATGAATACTACCAGAAGCCAGATGAAATAGTTGTGACCATATTTGCAAAGGGCATACCAGCAAAAAATGTGGTTGTTGAATTTGGTGAACAGATACTGAGCATTACGATTGAGATTCCTGGTGAGGATGCATATTATCTTCAACCTCGCTTATTCGGGAAGATAATACCTGAAAAGTGCAGATATGAAGTAATGTCAACCAAAATTGAGATCCGCCTTGCGAAAGCTGAAGCAATTGTCTGGACATTTCTGGAATTTACTAGGGAAAATATTGTTCCACAGAAGATAAATGTGCCGTCAGGTGTTGGATCCCAGAAACCTACTTACCCATCTTCAAAATCAAGAGCTGTTGATTGGGATAAGTTGGAAGCTCAAGTCAAGAAAGAGGAAAAAGAAGAGAAGCTAGATGGTGATGCAGCTTTGAACAAACTGTTCCGTGACATATACCAAGATGCTGACGATGACATGAGGCGGGCCATGAGGAAGTCTTTTCTGGAGTCAAATGGGACAGTGTTGTCCACAAACTGGAAAGAAGTAGGTTCAAAGAAGGTGGAAGGCAGCCCTCCTGATGGTATGGAGTTAAAGAAATGGGAGTACTGA 1131 0.4492 MAPDLEKRAKEAFVDDNFELAVELYTQAIDMDPKNADLFADRAQANIKLKSYTEAVADANKAIELDPSMAKAYLRKGTACIKLEEYQTAKAALEAGASLPPGDSRFTNLIKECDALIAEETSDLPKEATHGAPPSDVSPSVESHSSHVTTEHVNDAEPGHDISHHPTLVTSATPKYRHEYYQKPDEIVVTIFAKGIPAKNVVVEFGEQILSITIEIPGEDAYYLQPRLFGKIIPEKCRYEVMSTKIEIRLAKAEAIVWTFLEFTRENIVPQKINVPSGVGSQKPTYPSSKSRAVDWDKLEAQVKKEEKEEKLDGDAALNKLFRDIYQDADDDMRRAMRKSFLESNGTVLSTNWKEVGSKKVEGSPPDGMELKKWEY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00449 376 ProSiteProfiles SGS domain profile. 285 376 IPR007699 -
Eupl08g00449 376 CDD p23_CS_SGT1_like 179 262 - -
Eupl08g00449 376 ProSiteProfiles CS domain profile. 173 262 IPR007052 -
Eupl08g00449 376 PANTHER PROTEIN SGT1 HOMOLOG 2 374 IPR044563 GO:0051087
Eupl08g00449 376 Pfam CS domain 177 252 IPR007052 -
Eupl08g00449 376 FunFam Protein SGT1 homolog 1 132 - -
Eupl08g00449 376 MobiDBLite consensus disorder prediction 148 162 - -
Eupl08g00449 376 Gene3D - 174 264 IPR008978 -
Eupl08g00449 376 FunFam Protein SGT1 homolog A 171 275 - -
Eupl08g00449 376 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Eupl08g00449 376 Pfam Tetratricopeptide repeat 70 101 IPR019734 GO:0005515
Eupl08g00449 376 Pfam Tetratricopeptide repeat 37 68 IPR019734 GO:0005515
Eupl08g00449 376 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Eupl08g00449 376 Pfam SGS domain 295 374 IPR007699 -
Eupl08g00449 376 SUPERFAMILY HSP20-like chaperones 171 269 IPR008978 -
Eupl08g00449 376 SMART tpr_5 2 35 IPR019734 GO:0005515
Eupl08g00449 376 SMART tpr_5 36 69 IPR019734 GO:0005515
Eupl08g00449 376 SMART tpr_5 70 103 IPR019734 GO:0005515
Eupl08g00449 376 Gene3D Tetratricopeptide repeat domain 1 127 IPR011990 GO:0005515
Eupl08g00449 376 MobiDBLite consensus disorder prediction 125 167 - -
Eupl08g00449 376 SUPERFAMILY TPR-like 5 113 IPR011990 GO:0005515
Eupl08g00449 376 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00449 Eupl-Chr8 8120267 8144761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00449 1 102 U-box Gene Family AT3G07370 29.907 2.28e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00449 K12795 - nnu:104590354 558.525