Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00446 ATGTCGATGGATGAGAGATTGTTGGACGACATCATACAGCGGCTTCTCGATGCGAAGAACGGCCGGACGCCGAGGCAGGTCCAGATCACCGAGGCGGAAATCCGGCAACTTTGCGTTTCTTCTAAGGATATCTTCCTCAGCCAGCCTAATCTTCTCGAGCTCGAAGCTCCAATCAAGATTTGTGGTGATATTCATGGTCAGTATTCTGATCTTCTCCGACTGTTTGAGTATGGTGGGTTCCCACCAGAAGCAAATTATTTGTTCTTGGGGGACTATGTTGACCGTGGTAAGCAGAGCATAGAGACCATATGCCTTCTCCTTGCTTACAAGATCAAATACCCGGAGAACTTTTTTCTTCTCAGAGGCAACCATGAGTGCGCTTCCATCAACCGTATATATGGGTTCTATGACGAGTGCAAGAGGAGGTTTAATATTCGCCTCTGGAAGATATTTACTGATTGCTTTAATTGCCTACCAGTAGCTGCTCTTATTGATGAGAAGATCCTTTGCATGCATGGAGGATTGTCGCCAGACTTGAACAACTTGGATCAGATCAGGAATATTGCTCGCCCTGTTGATGTGCCGGATCAGGGCCTCCTCTGTGATTTGCTGTGGGCTGATCCTGATAATGATATTGAAGGTTGGGGGGAGAACGATAGAGGTGTATCTTATACATTTGGGGCTGACAAGGTTGCTGAGTTTCTTCAGAAACATGACCTTGATCTCATTTGCCGAGCTCACCAGGTTGTAGAAGATGGGTATGAGTTCTTTGCAAAACGAAAGCTGGTGACCATATTCTCTGCCCCAAATTATTGTGGGGAGTTTGACAATGCTGGTGCCATGATGAGCGTGGACAACACATTAACATGTTCCTTTCAGATCCTTAAGCCCTCTGACAAGAAGGGAAAACTAGGATTCAGCAATGTGTCAAGACCAGGAACGCCACCACATAAGGTACAAAAGAATGAATCAATCGCCTCTGAAACGTCTGATCTTTTAAAAGACAGTAATCGATAA 1017 0.4553 MSMDERLLDDIIQRLLDAKNGRTPRQVQITEAEIRQLCVSSKDIFLSQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLNNLDQIRNIARPVDVPDQGLLCDLLWADPDNDIEGWGENDRGVSYTFGADKVAEFLQKHDLDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGAMMSVDNTLTCSFQILKPSDKKGKLGFSNVSRPGTPPHKVQKNESIASETSDLLKDSNR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00446 338 CDD MPP_PP1_PPKL 8 297 - -
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 86 113 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 239 259 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 57 84 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 261 277 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 153 179 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 119 143 IPR006186 GO:0016787
Eupl08g00446 338 PRINTS Serine/threonine phosphatase family signature 182 209 IPR006186 GO:0016787
Eupl08g00446 338 MobiDBLite consensus disorder prediction 313 338 - -
Eupl08g00446 338 ProSitePatterns Serine/threonine specific protein phosphatases signature. 120 125 IPR006186 GO:0016787
Eupl08g00446 338 Pfam Calcineurin-like phosphoesterase 57 249 IPR004843 GO:0016787
Eupl08g00446 338 Gene3D - 1 308 IPR029052 -
Eupl08g00446 338 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 11 302 - -
Eupl08g00446 338 SMART pp2a_7 29 299 IPR006186 GO:0016787
Eupl08g00446 338 MobiDBLite consensus disorder prediction 305 338 - -
Eupl08g00446 338 FunFam Serine/threonine-protein phosphatase 1 305 - -
Eupl08g00446 338 SUPERFAMILY Metallo-dependent phosphatases 17 300 IPR029052 -
Eupl08g00446 338 Pfam Serine-threonine protein phosphatase N-terminal domain 8 55 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00446 Eupl-Chr8 8057286 8065663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00446 58 242 Calmodulin-binding Proteins AT5G63870 32.273 3.10e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00446 K06269 - csin:114320828 615.15