Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00429 ATGGCTGCTTCATCGTCTTCTTCCTTGATTTTCTTCTTCTTCTTCTTCGGTCTCGCCGAGTTGATACTCGGGAGCCAGATTCCGCTTGGTTCAAGATTGTCGGCAGGAGAAAACCGAGAATGGGTATCCGATAACGGAACTTTTGCTTTTGGGTTCACTCCAACTGACTCAGAAGATCAATTTCAGCTCGCAATTTGGTACGCCGAGCTTCCCGGGGATCGAGTTATAGTTTGGTCTGCTAACCGGTCTTTGACTTATATGTCAACGATTTCATTTTCTCTCAATCATCTAAATAGAAATTCTCTGGTCGGAAAAGATGCAATCTTGGAGCTTGACACCACCGGAAATCTCGTACTCCTCGACCGGAAAACCACAGTATGGACATCGAACACCTCCGGCGCCGGCGTCGAAATGGCATCAATGTTAGACTCCGGCAACTTCATTCTCTACAACGACACTCTTGGCCCTGTATGGCAAAGCTTCTCACATCCATATGACACACTCCTCCCTGGCCAACCGTTAACGGTTTCCTTAGAGCTGACATCATCAGAGTCACCTTCACATGGTGGTTATTACACCCTTAAAATGCTCCAGGAACCCACTTCACTAAGCCTTGCCCTCACATACAACTCGCCGGAATCTTACGACGCATCTCTGGAATCGCACACCAATTACTCATACTGGTCAGGACCCGAGATCTCGAATGTGACTGGGGATGTTGTAGCATTACTGGATGAATCAGGGAGTTTTAGTATCGTGTATGGCGCTTTATCGGATGGAGTTGTGTATGTGTACAAGAATGATGGGAATGATTTTCGACTGTCGTCGGCTGGAAACCAATCAGTCCTCAGGCGGTTAACACTCGAGACGAACGGGAATTTACGATTGTATCGATGGGACAACGATGTAAACGGGTCTCGCCAGTGGGTACCAGAGTGGGCAGCAGTGTCGAACCCATGTGAGATCGCCGGAGTCTGCGGTAATGGCATATGTAACTTGGATGGAAGCAAGACCAATGCTAGCTGTACTTGCCTACCTGGAACTTCTCAAGTGGGGCCTGATTTCGGATGCTCGACAAACTCGTCGTTGACAGCTAACTGCAATCTCCAGTCACATCAAAATTCATCGACATCCCAGTTCAAGATCACAACAGTACCTCAGACCAACTACTACTATCATGAATCATCAGTTGTAGCAAACTACAGTGATATCCCAACAGTCTCCAAGTGTGGGGATGCTTGTCTATCGGATTGCGAGTGTGTTGCTTCCGTTTACGGGCTCGACGAGGAAAAAGCCTACTGTTGGATTCTGAAGAGTTTGGTGTTTGGGGGGTTTGAGGACCCGGACTCAACGCTATTTGTGAAGGTTGGGAATAATGGCTCGACAACACCGGGCGGACGCGATACAAGGCCTGGGGGATCATCAGAAGGGTCTAGCAATGGCAAGGACAAGGTTTTGGTCATTCCAATTGTTCTTTGCATGCTTGTTCTTATCGCGTTCCTCGGTTTCTTGTTATATTATAGCGTTCATAGACGGAGATCCATAAAGAGAGCCTTCGACAGCTCTTTGAAGGTGTCGGGTGCTCCAATGAATTTCAGTTACCGGGAGCTGCAGAGCGCGACCAGTAATTTTTCTCAGTTGCTTGGAACAGGAGGGTTTGGAAGAGTTTTCAAGGGAAACCTTGGAGATGGGACCTTGGTTGCAGTGAAGAAATTAGAAAGGGTTTTACCTCATGGAGAGAAGGAATTCATCACAGAAGTAAACACCATTGGATCAATGCATCACATGAACTTGGTTCGCCTATGCGGATTCTGCTCCGAGGGGTCGCAGCGACTTCTAGTATACGAGTTTATGCAAAATGGGTCACTGGACAAATGGATATTTCCTTCATGTAATCGCCGAGACAGACTGCTCGACTGGCAAACCCGCTTCCATATAGCCATTGCCACAGCCCAAGGGATTGCATATTTCCACGAGCAATGCAGGAATCGAATCATACACTGCGACATCAAGCCAGAGAACATTCTCTTAGATGAGAATTTCTGTCCAAAAGTATCAGATTTTGGACTAGCTAAATTGATGGGAAGAGAGCACTCTCATGTGGTCACAATGGTTCGAGGCACCAGAGGCTACTTGGCTCCTGAGTGGGTTAGTAACCGGCCTATCACTGTCAAAGCTGATGTTTACAGCTATGGAATGCTTCTTCTAGAAATCATAGGTGGCCGGAGAAACCTCGACATGTCTCTCGATGCAGACGATTTCTTCTATCCTGGATGGGCTTTCAAGGAGATGATAAATGGAACGCCGATGAAAGTTGCGGATAAACGGCTAATGGGGATTGTTGAAGAAGAGGAGATGGTGAGGGGAATGAAAGTTGGCTTCTGGTGCATCCAGGATGAGGTGTGGATGAGACCATCAATGGGAGAAGTAGTGAAGATGTTGGAAGGATCAGTTGAGATCAACCCACCACCTATGCCTCAGACTGTATTGGAGTTAATTGAGGAAGGGTTAGATCATGTTTACAAGGCCATGAAGAGGGAGTTCAACCACTGCAGCTCCTTCACCATTGCTAGCCACCCATTATCAAATGCTACTTGTAGTTATTCCACCATGTCACCAAGATAA 2625 0.4712 MAASSSSSLIFFFFFFGLAELILGSQIPLGSRLSAGENREWVSDNGTFAFGFTPTDSEDQFQLAIWYAELPGDRVIVWSANRSLTYMSTISFSLNHLNRNSLVGKDAILELDTTGNLVLLDRKTTVWTSNTSGAGVEMASMLDSGNFILYNDTLGPVWQSFSHPYDTLLPGQPLTVSLELTSSESPSHGGYYTLKMLQEPTSLSLALTYNSPESYDASLESHTNYSYWSGPEISNVTGDVVALLDESGSFSIVYGALSDGVVYVYKNDGNDFRLSSAGNQSVLRRLTLETNGNLRLYRWDNDVNGSRQWVPEWAAVSNPCEIAGVCGNGICNLDGSKTNASCTCLPGTSQVGPDFGCSTNSSLTANCNLQSHQNSSTSQFKITTVPQTNYYYHESSVVANYSDIPTVSKCGDACLSDCECVASVYGLDEEKAYCWILKSLVFGGFEDPDSTLFVKVGNNGSTTPGGRDTRPGGSSEGSSNGKDKVLVIPIVLCMLVLIAFLGFLLYYSVHRRRSIKRAFDSSLKVSGAPMNFSYRELQSATSNFSQLLGTGGFGRVFKGNLGDGTLVAVKKLERVLPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGSQRLLVYEFMQNGSLDKWIFPSCNRRDRLLDWQTRFHIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSLDADDFFYPGWAFKEMINGTPMKVADKRLMGIVEEEEMVRGMKVGFWCIQDEVWMRPSMGEVVKMLEGSVEINPPPMPQTVLELIEEGLDHVYKAMKREFNHCSSFTIASHPLSNATCSYSTMSPR* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00429 874 SUPERFAMILY Protein kinase-like (PK-like) 525 815 IPR011009 -
Eupl08g00429 874 Gene3D - 22 163 IPR036426 -
Eupl08g00429 874 SMART blect_4 32 164 IPR001480 -
Eupl08g00429 874 SMART serkin_6 542 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00429 874 Gene3D Phosphorylase Kinase; domain 1 507 617 - -
Eupl08g00429 874 CDD B_lectin 42 164 IPR001480 -
Eupl08g00429 874 PIRSF SRK 1 862 IPR024171 GO:0004674
Eupl08g00429 874 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 618 824 - -
Eupl08g00429 874 Gene3D Transferase(Phosphotransferase) domain 1 618 829 - -
Eupl08g00429 874 ProSiteProfiles Bulb-type lectin domain profile. 26 162 IPR001480 -
Eupl08g00429 874 PANTHER OS07G0415500 PROTEIN 4 826 - -
Eupl08g00429 874 ProSiteProfiles Protein kinase domain profile. 542 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00429 874 ProSitePatterns Protein kinases ATP-binding region signature. 548 571 IPR017441 GO:0005524
Eupl08g00429 874 CDD STKc_IRAK 548 816 - -
Eupl08g00429 874 Pfam Protein kinase domain 545 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00429 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Eupl08g00429 874 Pfam D-mannose binding lectin 98 178 IPR001480 -
Eupl08g00429 874 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 177 IPR036426 -
Eupl08g00429 874 FunFam serine/threonine-protein kinase PBS1-like 510 617 - -
Eupl08g00429 874 MobiDBLite consensus disorder prediction 456 479 - -
Eupl08g00429 874 Pfam S-locus glycoprotein domain 277 347 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00429 Eupl-Chr8 7610635 7616593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00429 494 824 Receptor kinase-like Gene Family AT5G20050 43.380 3.93e-83 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl08g00429 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00429 - - nnu:104593679 1363.98