Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00390 ATGGGAAACAATGAAGCTGGGACACCTAAGTCTGAGAAATCACCTTCACCTGCACAGGAACAGGCCAATTTTCATGCATATCCTGATTGGGCGACTATCCAGGCATATTATGGGCCCGGAGTCACTCTACCACCACCATATTTCAATGCTGCAGTTACATCTGGTCACCCTCCTCACCCATATATGTGGGGCCCACCTCAGCCTATGATGCCACCTTATGGGACACCCTATGCTGCCGCAATCTACTCGCATGGAGGTGTTTATGCTCATCCTTCAGTACCTCTTGGGTCACATGGTCATGGGATCCTGTCATCGCCTGCCATAAGTGAAGCCATGGTGGCAACTCCTTTGAGCATAGCAACCCCTGCCAAGTCACCAAGCAATAAAGATCAAGGTTTAATGAAGAAGTTGAAAGGATTTGATGGGCTGGCAGTGTCAATTGGCAATGGCAATTCTGGGAGTGCTGCAGGGTCACATAGTGCGGAAAGTGGTACAGAAGGTTCCAGCGATGGAAGTGACGGGAATACTGCAGAAGGGGACAAAATGCAGAGGAAAAGAAGCAGTGAGGGCTTGCGATCTACAGGCAAGGATGGGAAAGTTGACTCTCAAGCCAATCCCATACTTACTGGAGAGGCAAATGCCGCTTCCAGTAGGTCGCTGGGGGTTTCTTTGGCTTCTGCTGGTGTTGCAGGAAAACCAGTAGGAACTGTACCTCTATCTACCATCACCCCGGCCTTGGAGCTCAGGGGTTCCCCCAGTGGTAAAACAAAGACCACTGCAGCTACTGTCCATCCTGCATCTGGTGCAGTGGTGCCGGGTGCCGAACACTGGATTCCGAATGAACGAGAGCTGAAACGTGAGAGGAGGAAACAGTCTAACAGAGAATCGGCCAGAAGGTCAAGGTTGAGGAAGCAGGCGGAGAGCGAAGACCTTGCCACAAAAGTTGAATCCCTGAATGTTGAGAATCTGGCCCTTAGATCCGAAATAAATCGATTAACAGAGAATTCAGACAAACTGAGGATCGAAAATGCTGCATTAATGGAGAAACTGAAAAATGCACAACTAGGACAGACAGGAGAAATAGTTTCTGATAAGATCGCAGCACAGGGGGCAGCACCTGTCAGTACCGAGAACTTCTTATCCAGAGTAAACAACTCAGGTTCTGTTACTACAAACACACTAGGGGAGAGCGAAGCCATTGAAAACTCAAAATCGAGCTCCAAGCTTCATCAGCTCTTGGAATCAAGTCCAAGGACCGATGCTGTGGTTGCAGGCTGA 1278 0.493 MGNNEAGTPKSEKSPSPAQEQANFHAYPDWATIQAYYGPGVTLPPPYFNAAVTSGHPPHPYMWGPPQPMMPPYGTPYAAAIYSHGGVYAHPSVPLGSHGHGILSSPAISEAMVATPLSIATPAKSPSNKDQGLMKKLKGFDGLAVSIGNGNSGSAAGSHSAESGTEGSSDGSDGNTAEGDKMQRKRSSEGLRSTGKDGKVDSQANPILTGEANAASSRSLGVSLASAGVAGKPVGTVPLSTITPALELRGSPSGKTKTTAATVHPASGAVVPGAEHWIPNERELKRERRKQSNRESARRSRLRKQAESEDLATKVESLNVENLALRSEINRLTENSDKLRIENAALMEKLKNAQLGQTGEIVSDKIAAQGAAPVSTENFLSRVNNSGSVTTNTLGESEAIENSKSSSKLHQLLESSPRTDAVVAG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00390 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Eupl08g00390 425 MobiDBLite consensus disorder prediction 383 414 - -
Eupl08g00390 425 CDD bZIP_plant_GBF1 286 337 IPR045314 GO:0003700|GO:0006355
Eupl08g00390 425 MobiDBLite consensus disorder prediction 177 196 - -
Eupl08g00390 425 MobiDBLite consensus disorder prediction 151 176 - -
Eupl08g00390 425 Gene3D - 284 338 - -
Eupl08g00390 425 MobiDBLite consensus disorder prediction 151 215 - -
Eupl08g00390 425 MobiDBLite consensus disorder prediction 279 309 - -
Eupl08g00390 425 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Eupl08g00390 425 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Eupl08g00390 425 MobiDBLite consensus disorder prediction 1 24 - -
Eupl08g00390 425 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Eupl08g00390 425 Coils Coil 315 349 - -
Eupl08g00390 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Eupl08g00390 425 MobiDBLite consensus disorder prediction 1 21 - -
Eupl08g00390 425 Pfam Disordered region downstream of MFMR 130 257 - -
Eupl08g00390 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Eupl08g00390 425 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Eupl08g00390 425 MobiDBLite consensus disorder prediction 383 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00390 Eupl-Chr8 6751331 6760308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00390 10 425 bZIP Transcription Factor Family AT2G46270 47.031 1.08e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl08g00390 MFMR_assoc 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00390 K09060 - msin:131241281 508.834