Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00384 ATGGACGCTTGGTTCATTTTCTCTGTGATTCTCTTGTTTGGATTGCTTGTCTCGCTAGGAACCGCCGATCCAGTTGAAGACAAACGAGCTTTACTCGATTTCGTTAAGAATCTCCCCCACTCACGCGCTCTCAACTGGAACGAAAGCTCTACTGTGTGCGACAACTGGACCGGAGTGACCTGCAGCGCGGATAACTCTCGGGTCATAGCCGTTCGTTTGCCCGGAGTCGGATTCCAAGGACGGATCCCGCCCAACACTCTCAGTCGCCTCTCTGCACTTCAGATCTTAAGCCTCAGATCCAACGGTATCACTGGCTCTTTCCCTTCTGATTTCTCCAATCTCAAGAACCTATCTTTACTGTATCTTCAGTTCAACGACTTCTCTGGTCCGCTGCCGTCAGATTTCTCAGTTTGGAAGAATCTCACCATCATCAATCTCTCCTACAACCTCTTCAATGGCACCATCCCTTCTTCCATCTCGAATCTGACTCATTTAACGGCTCTAAATCTCGCTAACAACTCGCTTTCTGGAGAAATTCCTGATCTCCATCTCCCCAATCTGCAACAACTAAACCTAGCTAACAATAGTCTCACTGGGACTGTTCCAAGTTCTCTTCAGAGGTTTCCAAGGTCGGCATTTAATGGTAACAATATTTCATTTGTAAATTCTTCTCCGCCTCCACCGTCTCTGCGTCCTCCCGTTCGTCCACCTGTCTCTCCACCGATACCAAAATCGAAAAAAACTGGAAAGCTTAGTGAATCTGCGTTGCTGGGAATTATATTAGGCGGTTGTGTTATTGGGTTTGTGGCATCTGCATTTCTTATATTTGTTTGCTGCTCTAAAAGAAAAGGTGAAAATGTGTTCTCTGGGAAGTCGCAGAAGGGCCAAAGATCACCGGAGAAAGCAGTTACAGGAAGCCAAGATGGGAATAACAGGCTTGTTTTCTTTCAGGGTTGTAATTACGCATTCGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAAGTGCTTGGGAAGGGGACGTTTGGGATGGCGTATAAGGCAATTCTTGAGGATGCAACCACAGTGGTTGTGAAGAGGTTGAAGGAGGTGGGTGTAGGGAAGCGGGAATTCGAGCAGCAGATGGAGGTCGCGGGGAGGATTCGGCATGAGAATGTGGTTGAGCTAAGGGCGTATTACTATTCGAAGGATGAGAAGCTTATGGTTTATGATTATTACAGCCAGGGGAGTGTCTCCACAATGTTACATGGAAAAAGAGGGGAGGAGAGGATTCCTCTCGACTGGGATACTCGACTAAGAATAGCCATTGGTGCAGCAAGAGGTATCGCTCACATTCACTCAGAGAACGGCGGGAAGCTTGTCCATGGGAACATAAGATCCTCCAACATATTCCTCAACAACCAAAATTATGGTTGCGTATCTGATCTCGGCCTGAGTACTATAATGAGCCCAGCAGCCCCACCTATCTCCCGGGCTGCTGGGTATAGGGCCCCAGAAGTGCTCGACGCCCGGAAGGCAGCTCAGCCATCCGATATCTACAGCTTTGGAGTGCTGTTGCTCGAGCTCCTCACTGGGAAGTCCCCTGTTCATGTCGTGGGTGGTGACGAAGTGGTCCACTTGGTCCGGTGGGTCCAGTCTGTTGTCCGAGAGGAATGGACAGCTGAAGTGTTCGACGTGGAACTAATGAGGTATCCAAACATAGAGGAAGAGATGGTGGAGATGCTACAGATAGCAATGGCGTGTGTAGTGAGAATGCCAGAGCAGAGGCCGAAAATTCCGGATGTAGTGAAGATGGTGGAGGATATCCGACAAATGGATACTGGAAACCGGCCATCATCCGAAGCTAAATCAGAGATCTCGACACCACCACCACCAGCAGTTGGGACAATATCATCCCCAGTCCCACACTGA 1908 0.4885 MDAWFIFSVILLFGLLVSLGTADPVEDKRALLDFVKNLPHSRALNWNESSTVCDNWTGVTCSADNSRVIAVRLPGVGFQGRIPPNTLSRLSALQILSLRSNGITGSFPSDFSNLKNLSLLYLQFNDFSGPLPSDFSVWKNLTIINLSYNLFNGTIPSSISNLTHLTALNLANNSLSGEIPDLHLPNLQQLNLANNSLTGTVPSSLQRFPRSAFNGNNISFVNSSPPPPSLRPPVRPPVSPPIPKSKKTGKLSESALLGIILGGCVIGFVASAFLIFVCCSKRKGENVFSGKSQKGQRSPEKAVTGSQDGNNRLVFFQGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDATTVVVKRLKEVGVGKREFEQQMEVAGRIRHENVVELRAYYYSKDEKLMVYDYYSQGSVSTMLHGKRGEERIPLDWDTRLRIAIGAARGIAHIHSENGGKLVHGNIRSSNIFLNNQNYGCVSDLGLSTIMSPAAPPISRAAGYRAPEVLDARKAAQPSDIYSFGVLLLELLTGKSPVHVVGGDEVVHLVRWVQSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIAMACVVRMPEQRPKIPDVVKMVEDIRQMDTGNRPSSEAKSEISTPPPPAVGTISSPVPH* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00384 635 MobiDBLite consensus disorder prediction 225 243 - -
Eupl08g00384 635 Pfam Protein kinase domain 333 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00384 635 MobiDBLite consensus disorder prediction 286 305 - -
Eupl08g00384 635 PANTHER OS05G0588300 PROTEIN 7 612 - -
Eupl08g00384 635 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515
Eupl08g00384 635 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Eupl08g00384 635 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Eupl08g00384 635 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Eupl08g00384 635 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Eupl08g00384 635 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Eupl08g00384 635 SUPERFAMILY Protein kinase-like (PK-like) 334 598 IPR011009 -
Eupl08g00384 635 MobiDBLite consensus disorder prediction 222 248 - -
Eupl08g00384 635 FunFam pollen receptor-like kinase 1 299 404 - -
Eupl08g00384 635 MobiDBLite consensus disorder prediction 289 305 - -
Eupl08g00384 635 Gene3D Transferase(Phosphotransferase) domain 1 406 619 - -
Eupl08g00384 635 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 405 612 - -
Eupl08g00384 635 MobiDBLite consensus disorder prediction 602 635 - -
Eupl08g00384 635 SUPERFAMILY L domain-like 37 208 - -
Eupl08g00384 635 Gene3D Ribonuclease Inhibitor 140 225 IPR032675 -
Eupl08g00384 635 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515
Eupl08g00384 635 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00384 Eupl-Chr8 6671009 6675295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00384 20 621 Receptor kinase-like Gene Family AT4G23740 62.319 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl08g00384 Pkinase 7.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00384 - - ming:122081789 951.814