Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00359 ATGGAGAACATGGGGGATTTGGATAAAAGGCCTTTGATCAATGAGCTAACCCAAGGGAGGGAGCTAGCGAAGCAACTCCGGATCTATCTCGATCCAACTTCTATGACCGGAGGGCTGCTAATAGAAAAGATACTATCGTCCTTTGACAAGGCTCTTTCATTGATGAATAGGACTGGATTGGATGGAGAACCTCAGCCGATGACACCCACTGTCGGGATGTCAGACTCCCCACGATCGATCAGTGGAAGTCCGCAAAGCGATGATACCGACCACAGAGATGTATTCAAGAAGAGGAAGTCACTACCTCGATGGACTGAACAAGTGCAAGTTTGCTCAAGGACGGGACTCGAAGGTCCGCTCGATGATGGCTACAGTTGGAGGAAATATGGACAGAAAGACATCCTTGGAGCTAAGCATCCAAGAGGCTATTATCGATGCACTTATCGTAACGTTCAAGGGTGTTTGGCTACGAAGCAAGTTCAAAGATCCGACGACAACCCATCGATCATCGATGTAACTTATCGAGGAAGGCACACTTGTATCCAAGTATCACATCTAATTCAAGCGTCGCAGTCGTCGGATAAGGAAGATCAGAAACAAAACCAAGATCAGCCAGAACAAAAGAAGCAAAAACAATCACAAGAGATACTCCTGAATTTCAGAACAGGACTTAAAGTCAAAACTGAAAACTTAGGCAGCCAGGAGCTTGCATCATCCTTTTCCTTCCCTCCGACATCGATGGAAAGCGTAAAGACCGACGATCAAATCTTTTCATCGACTCCTTTCGATAATAATTTCATGGGTAGTTTTTCTCCTACATTTATATCCCCGACTACATCGGAATCGAACTACTTCTCGCCTTGCCGGATAACAAGCTTTAGTGGTGGACCAAATTTTCAAAATTCGGAATCCGATCTCAATGAGATAATCTCAGCTGCTACTTCTGCCTCCAATTCTCCAATTGTGGACTTGGATTTTACACTTGATCCGGTGGAATTCGACCCGAATTTCCCTTTCGACATGCCGGGCTTCTTCAATTAA 1041 0.4505 MENMGDLDKRPLINELTQGRELAKQLRIYLDPTSMTGGLLIEKILSSFDKALSLMNRTGLDGEPQPMTPTVGMSDSPRSISGSPQSDDTDHRDVFKKRKSLPRWTEQVQVCSRTGLEGPLDDGYSWRKYGQKDILGAKHPRGYYRCTYRNVQGCLATKQVQRSDDNPSIIDVTYRGRHTCIQVSHLIQASQSSDKEDQKQNQDQPEQKKQKQSQEILLNFRTGLKVKTENLGSQELASSFSFPPTSMESVKTDDQIFSSTPFDNNFMGSFSPTFISPTTSESNYFSPCRITSFSGGPNFQNSESDLNEIISAATSASNSPIVDLDFTLDPVEFDPNFPFDMPGFFN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00359 346 Gene3D WRKY domain 105 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl08g00359 346 MobiDBLite consensus disorder prediction 69 84 - -
Eupl08g00359 346 MobiDBLite consensus disorder prediction 196 210 - -
Eupl08g00359 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 269 IPR044810 GO:0003700
Eupl08g00359 346 Pfam WRKY DNA -binding domain 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00359 346 MobiDBLite consensus disorder prediction 57 92 - -
Eupl08g00359 346 SUPERFAMILY WRKY DNA-binding domain 119 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl08g00359 346 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00359 346 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl08g00359 346 MobiDBLite consensus disorder prediction 187 213 - -
Eupl08g00359 346 FunFam WRKY transcription factor 53 106 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00359 Eupl-Chr8 6155616 6158331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00359 4 338 WRKY Transcription Factor Family AT4G11070 36.232 2.25e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl08g00359 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00359 - - tss:122664117 417.542