Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00358 ATGGATAAACGTGGCCGGAAGCAACCAAAAACCACCAATTCCGAAGAGGTGAGTAGTATTGAGTGGGAATTCATAAATATGACTGAACAAGAAGAAGATCTCATCTATAGAATGTATAAACTCGTTGGAGACAGGTGGGCTTTAATTGCTGGCAGGATACCGGGTCGGAAACCAGAAGAAATAGAGAGGTTTTGGATAATGAGACATGGAGAAGGTTTTGCTGCTAGAAGAGAAGAGCTTGATGAGAGAAAAGATTGA 258 0.4147 MDKRGRKQPKTTNSEEVSSIEWEFINMTEQEEDLIYRMYKLVGDRWALIAGRIPGRKPEEIERFWIMRHGEGFAARREELDERKD* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00358 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 67 - -
Eupl08g00358 85 SMART sant 23 71 IPR001005 -
Eupl08g00358 85 Pfam Myb-like DNA-binding domain 27 66 IPR001005 -
Eupl08g00358 85 CDD SANT 26 65 IPR001005 -
Eupl08g00358 85 ProSiteProfiles Myb-like domain profile. 28 65 IPR001005 -
Eupl08g00358 85 SUPERFAMILY Homeodomain-like 28 66 IPR009057 -
Eupl08g00358 85 Gene3D - 27 68 - -
Eupl08g00358 85 FunFam MYB-like transcription factor 26 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00358 Eupl-Chr8 6132173 6133170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00358 26 65 MYB Transcription Factor Family AT5G14750 57.500 1.01e-13 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl08g00358 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00358 K09422 - msin:131245052 146.362