Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00336 ATGACGAAGGAAGAAGTTGAGAATGGAAGAGATGATATGTTGATCGATGGATGTGAACCTGAACAGAGGCAAGGAAATGCTGTCCCTGAAGGATTTAACGCCAATTATCTTAAAGTTTACTATGGAAAGCTGTTTCCACACGCTGAAATCTTTAAATGGATGTCCTATGGAAATGATGGGAAGCATCCAGCCTGCGACCAATCCTACTTCGGACGAAGAGAATTTTCCTTCACTCTGGATAATGACATATACCTCCGGTTCCAATCGTTCAAAAGTGCAGTTGAATTGGAAAGTTCTATCAAAGAAAAGTGCCCATTTAAAATTGATATTGGGCCTGTGTACAGCGTAGATCCTGCTAAGAGGCATGCCTATGCACAAACTGGTGATAATGTTTTCACGCCAGTGGAGAGGGAGCTAGTTTTTGACATAGATATGACAGATTACGATGATGTTCGATATTGCTGCTCGGGAGCTGATATTTGCTTGGACTGCTGGCCGTTAATGACCATTGCGATTAAAGTAATTGATACTGCCCTCAGAGATGACTTTGGTTTTAGTCACATTCTTTGGGTATATAGTGGCCGGCGTGGTGTTCATTGTTGGGTTTGTGATGGTAGAGCAAGAAGGTTGACCAATGAACAGAGAGCAGCTATTTGCGACTATTTCCGTGTATATAAGGGCAATGAAAATAGTCACAAGAAGGTTTCTTTAACGGGTCATGTTCTTCATCCTTTTCTAGTAAGATCATATACAGAAGTCCTGAGAACCTTCTTTGAAGAGAAATTGCTTTCTGGCCAAAAGCTATTTGCAACTGAGGAGAGATTTGAGAAGATTCTAGAAATGATTCCTGATGAATCTATTACTGCTGAGCTTCGGGGTAGATGGCAGGAGAATCGACGGTCCTCCATCTCCAAAGAAGATCTTAATGTTGTTCGGTGGGAGCAACTAAAACATCTGTTGCAGTCTGGAAAACAGAAGGTACAGGGGCTTCGTAGGTGTGTTGAAGAGATTGTTTTCTCGTATGCCTACCCCAGGCTTGATATGGAGGTTTCAAAACACATGAATCATTTGCTGAAGGCGCCATTCTGTGTACACCCAAAAACAGGCCGAGTTTGTGTTCCTATTGATCCTGACCATTGTGAGGAGTTCGATCCTACAGCTGTACCGACCCTTTCTACTCTTTTAGATGAACTTAACATGGGGGGTTTGAGTGCAGATCTTGAGAATGAATGGGACAACACCTCACTTGGCAAATCAATCAGGTTTTTCAAATTATCATTCTTGCAGCCCCTATTGAAATCTTGCAAGGAGGAGATGGAAAGTTCATATAATGCGAAACTTCAACAGTCAAAGAATTCGATAAGTTGGTAA 1371 0.4194 MTKEEVENGRDDMLIDGCEPEQRQGNAVPEGFNANYLKVYYGKLFPHAEIFKWMSYGNDGKHPACDQSYFGRREFSFTLDNDIYLRFQSFKSAVELESSIKEKCPFKIDIGPVYSVDPAKRHAYAQTGDNVFTPVERELVFDIDMTDYDDVRYCCSGADICLDCWPLMTIAIKVIDTALRDDFGFSHILWVYSGRRGVHCWVCDGRARRLTNEQRAAICDYFRVYKGNENSHKKVSLTGHVLHPFLVRSYTEVLRTFFEEKLLSGQKLFATEERFEKILEMIPDESITAELRGRWQENRRSSISKEDLNVVRWEQLKHLLQSGKQKVQGLRRCVEEIVFSYAYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPDHCEEFDPTAVPTLSTLLDELNMGGLSADLENEWDNTSLGKSIRFFKLSFLQPLLKSCKEEMESSYNAKLQQSKNSISW* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00336 456 Pfam DNA primase small subunit 141 376 IPR002755 GO:0003896|GO:0006269
Eupl08g00336 456 FunFam DNA primase 24 437 - -
Eupl08g00336 456 SUPERFAMILY Prim-pol domain 34 399 - -
Eupl08g00336 456 CDD AE_Prim_S 50 385 IPR014052 GO:0003896|GO:0006269
Eupl08g00336 456 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 38 397 IPR014052 GO:0003896|GO:0006269
Eupl08g00336 456 Gene3D DNA primase, PRIM domain 25 437 - -
Eupl08g00336 456 PANTHER DNA PRIMASE SMALL SUBUNIT 23 441 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00336 1 456 Core DNA Replication Machinery Family AT5G41880 65.427 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00336 K02684 - csin:114313298 832.787