Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00334 ATGAGGGTATGGTTAGGAACATACGATACCGCTGAGGTGGCAGCGTATGCGTACGATCGCGCAGCGTATAAGTTACGAGGCGAATACGCTCGCTTGAATTTCCCAAATCTCGGGGATGAGATGAAATTAGGATTTGGGGATAGGGCAAGGTTAAGTGCCCTAAGGTCCTCGATCGATGCCAAGATACAGGCAATTTGTCAGAAGACGAAGAGAGAGAGAGCTAGTCAAGGTAGTCATGGTAGTGGCAGTGAGAAAGGAAAGGTAGATTCATTGTCATCTTCATCTTCATCGTCGTCGTTCATTCCTATCAACAAGGGGTGTAACGAAATGTTGTCGTCGTCAGAAGAATCGTCAAAGGGCGACAATTCTCCGCCATCTACTTCGTTAGATTGTCCGATGACCTCAAAGGATATTGAATTCGAAGGTTGTTCACTCGCAACAATGCCGTCATTTGATCCAGATCTGATTTGGGAAGTTCTTGCTACCTAA 489 0.4601 MRVWLGTYDTAEVAAYAYDRAAYKLRGEYARLNFPNLGDEMKLGFGDRARLSALRSSIDAKIQAICQKTKRERASQGSHGSGSEKGKVDSLSSSSSSSSFIPINKGCNEMLSSSEESSKGDNSPPSTSLDCPMTSKDIEFEGCSLATMPSFDPDLIWEVLAT* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00334 162 SMART rav1_2 2 41 IPR001471 GO:0003700|GO:0006355
Eupl08g00334 162 Pfam AP2 domain 2 28 IPR001471 GO:0003700|GO:0006355
Eupl08g00334 162 MobiDBLite consensus disorder prediction 69 133 - -
Eupl08g00334 162 SUPERFAMILY DNA-binding domain 2 35 IPR016177 GO:0003677
Eupl08g00334 162 ProSiteProfiles AP2/ERF domain profile. 1 35 IPR001471 GO:0003700|GO:0006355
Eupl08g00334 162 Gene3D AP2/ERF domain 1 36 IPR036955 GO:0003700|GO:0006355
Eupl08g00334 162 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 160 - -
Eupl08g00334 162 MobiDBLite consensus disorder prediction 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00334 Eupl-Chr8 5876089 5877766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00334 1 161 AP2-EREBP Transcription Factor Family AT1G64380 47.222 3.60e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl08g00334 AP2 9.3e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00334 - - jre:109010126 182.185