Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00333 ATGGCAATGGGATTTTTTCAACGCTGGTTAGCAATCAATTGCACTGCGAGGTCACAAAAACCTTGTGGACAAAAGAGAAAATGTCGCGGTGGCATTACCGATGAACCTATCGCATTGGATGCCACTTATACTACATGGGTTGAGAAACACCCTTCAGCATTGAGCACGTTTGATCAGATGATGAATGCGGCAAAGGGGAAAAGGATCGTAGTGTTTTTGGATTACGATGGGACCCTCTCTCCGATTGTAGACGACCCGGATCAGGCATTCATGTCTAATGCAATGCGTTCAGCAGTAAGTGAAGTTGCACAGTATTTTCCGACGGCTATTATTAGTGGAAGGTGTCGAGACAAGGTATACGAGTTTGTACAATTAACAGATGTATACTACGCTGGGAGCCATGGAATGGATATAATGGCTCCAGTGCGACCTCCGAAGACAGGCGATGCGAAGTATCAAACGAGAGCCCTTGATAAAAAGGGGAATGAAGTTGTGCTCTTTCAACCTGCTCAAGAGTTCTTACCTGCAATTCAAGAGATATTGAAGGTTTTGGAGGAAAAAACCAAGAACATACAAGGTTCCATGATCGAAAATAATAAGTTCTGCATCTCTGTACATTTTCGGCGAGTTCATGAAGAGGATTTTTGCACACTAGAAGAGCAAGTCAAGTCTGTTCTTAAAGATTATCCTCATTTTCACCTGACAAGAGGTAGAAAGGTTATGGAGATACGCCCATCTATAAAGTGGGATAAGGGTCATGCCCTGGAATATTTACTTGACACTCTAGGGTTTGGGACCTCCAGTGATGTCCTGCCATTGTACATCGGCGACGATCGAACAGACGAAGACGCTTTCAAGGTTTTGCGAAGTAGGGAACAAGGTTACCCTATAATTGTGTCTTCGATCCCAAAGGACACAAAGGCTTCATACTCTCTGAGAGACCCATCAGAGGTGATGTCTTTCCTGTTGCGGCTAGCGAGATCGAGGAGAAACTCTTCTACTAAGTAG 1008 0.4425 MAMGFFQRWLAINCTARSQKPCGQKRKCRGGITDEPIALDATYTTWVEKHPSALSTFDQMMNAAKGKRIVVFLDYDGTLSPIVDDPDQAFMSNAMRSAVSEVAQYFPTAIISGRCRDKVYEFVQLTDVYYAGSHGMDIMAPVRPPKTGDAKYQTRALDKKGNEVVLFQPAQEFLPAIQEILKVLEEKTKNIQGSMIENNKFCISVHFRRVHEEDFCTLEEQVKSVLKDYPHFHLTRGRKVMEIRPSIKWDKGHALEYLLDTLGFGTSSDVLPLYIGDDRTDEDAFKVLRSREQGYPIIVSSIPKDTKASYSLRDPSEVMSFLLRLARSRRNSSTK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00333 335 Pfam Trehalose-phosphatase 72 316 IPR003337 GO:0003824|GO:0005992
Eupl08g00333 335 CDD HAD_TPP 70 319 - -
Eupl08g00333 335 FunFam Trehalose 6-phosphate phosphatase 170 246 - -
Eupl08g00333 335 Gene3D - 169 335 IPR023214 -
Eupl08g00333 335 Gene3D - 69 164 IPR023214 -
Eupl08g00333 335 NCBIfam trehalose-phosphatase 66 326 IPR003337 GO:0003824|GO:0005992
Eupl08g00333 335 FunFam Trehalose 6-phosphate phosphatase 175 333 - -
Eupl08g00333 335 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 333 IPR044651 GO:0004805|GO:0005992
Eupl08g00333 335 NCBIfam HAD-IIB family hydrolase 71 289 IPR006379 -
Eupl08g00333 335 SUPERFAMILY HAD-like 70 326 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00333 Eupl-Chr8 5851308 5863855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00333 19 333 Trehalose Biosynthesis Gene Families AT4G17770 25.740 3.00e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00333 K01087 - ming:122082586 468.388