Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00330 ATGTTATGCAACGCTAGCTTAAGGAACATAGCCGTACGAGTTGGGAATATCGGGAATTTTGCAAAAGGGAGGGGACAGTTGAAGAATTTTGGGAGGGTTTTGAATGCACGATCGGGGCGGCCTTATCGTTCAAATCGTGAATTTAGAGCAAGTGTAACCATGATGATCGACAGTGGTGCAACGGCTGAACCTGGAACCATTGTTGATGTGTTGCCGGAGAAAGAGAATGTTGATGATGGTGGGTATGCTAGCGGAGGACGGAAAAGTGACGATGGAAGGCTGAGCTGTGGGTATTCAAGTTTTAGGGGAAAGAGAGCTAGCATGGAGGATTTCTATGATGTTAAAATGGACAAGATTGAAGGCCAAACAGTCTGTCTGTTCGGGATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAACACTTGTTTGAGAATCTCATGAAGCACCCACAATTTATGACGGACACCAAATTGGCTATAAGTGAAACATATCAAAGGACTGATATGGACTTCTTGGATGCTGAAAGCAATACTTACCGGGATGATGGTTCGACAGCCTCGACGGCAGTGTTGGTTGGTCACCATCTATATGTAGCCAATGTTGGAGATTCACGGGCAGTAATATCAAGGGCAGGCAAAGCCATACCTCTCTCGGAAGATCATAAACCAAATAGAAGTGATGAGCGGAAGAGAATTGAAAATGCTGGAGGAGTTGTTATGTGGGCGGGTACTTGGAGAGTTGGAGGCGTGTTGGCAATGTCCCGTGCTTTTGGTAACCGTTTACTGAAACAGTTTGTTGTGGCAGAGCCTGAGATTCAGGAACAAGAGATCGATGATGAATTTGAATTCCTGGTGCTGGCTAGTGATGGACTCTGGGATGTAGTAACAAATGAAGAAGCTGTTTCCCTTGCGAGAACAGAAGAAGAACCTGAGGCAGCAGCTCGGAAGTTGACGGAGAACGCTTTTACTCGTGGCAGTGCCGACAACATCACCTGCATCGTGGTGAGATTCCACCACGACAAACCAGACCCAGATTTGGCTCAGGGTTAG 1062 0.4652 MLCNASLRNIAVRVGNIGNFAKGRGQLKNFGRVLNARSGRPYRSNREFRASVTMMIDSGATAEPGTIVDVLPEKENVDDGGYASGGRKSDDGRLSCGYSSFRGKRASMEDFYDVKMDKIEGQTVCLFGIFDGHGGSRAAEYLKEHLFENLMKHPQFMTDTKLAISETYQRTDMDFLDAESNTYRDDGSTASTAVLVGHHLYVANVGDSRAVISRAGKAIPLSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRLLKQFVVAEPEIQEQEIDDEFEFLVLASDGLWDVVTNEEAVSLARTEEEPEAAARKLTENAFTRGSADNITCIVVRFHHDKPDPDLAQG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00330 353 CDD PP2Cc 95 341 IPR001932 -
Eupl08g00330 353 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Eupl08g00330 353 ProSiteProfiles PPM-type phosphatase domain profile. 95 341 IPR001932 -
Eupl08g00330 353 PANTHER PROTEIN PHOSPHATASE 78 341 IPR015655 GO:0004722|GO:0006470
Eupl08g00330 353 SUPERFAMILY PP2C-like 93 342 IPR036457 -
Eupl08g00330 353 Pfam Protein phosphatase 2C 97 334 IPR001932 -
Eupl08g00330 353 SMART PP2C_SIG_2 77 341 IPR001932 -
Eupl08g00330 353 FunFam Probable protein phosphatase 2C 76 87 347 - -
Eupl08g00330 353 Gene3D - 87 346 IPR036457 -
Eupl08g00330 353 SMART PP2C_4 85 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00330 Eupl-Chr8 5761721 5775906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00330 1 345 PP2C-type Phosphatase Gene Family AT5G53140 68.732 4.36e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00330 K17506 - ming:122081663 556.214