Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00327 ATGGGAACTGTTTATGTGCCATTGGTGTGTCATTATAATGGAGAATTAAAACATGATACTAGAAACCCCATTTATGTTGGTGGGCACATGAAAGCAGATCGGGTCAGTAAGGATATTAGCTTCAGAGAATTTATTCTTAAGATGCGTGAATTGTGCAAGTTACCACCCGATGGTACGACCATCAGAATCAAATTTAGGTATCTCCTCGACCAATACACATCAATTGCCATGCAAGTGGAGGATGACGACTCGCTAAGCATCATAATGGATTTGTACCCTCATCATTGTTATGCCATTGTTGCCTATATTGAAAAACATCCAGCTCAAAACTCAACCACCACAACCCGAAGGTGTTATTTACCCGATTCTTTGGCAGGTTCTCATAAGGAAGAAGCCATGGGGGAAGTTTCTGTGAGACAAGTTGTTGGAAACACCATTGACACTGTAAAACAGGGTGATGTACAGAATCATGAGGGCATGCGTTACACGTTTAATGCATCTCCAATACACATGCACGAGACCCCATCCTCATCGATTGTTGCTGACCATTTGCATGATATGGCTAATACACCAGTCAATGCACACAGTCTGAATCACTTAGCAGGGGGCAGTTGTAACAACACTGAATCCGTTGTCATTGAAATGAGCTCCAAGGCATCTGAAGTTCCTTTGTCACTACCTAGGTATTATTCAGGAAACATTAGTACAATATCAAGCTCAGTTTCGGAAAGGATCCAAAGAGGCTTTGCATGGGGTTCTGAAGGTGTTAAAAGAATTAGAACATCATTAAACTTCCTCGAGTCTACAACAGACTCGAGTTCTCAGATGAAAGTTCTTCACCCAAGGGATCAATTTCTTCAAAGGTGGAATGAAATATGTTTACTGTTGTGCGTGATTGCAGTGTACACGGATGCCTTGTTCTTATACATCCCAGTGATTGATGGCAAGAAGAACTGCTTTGGTTTTGATGAGAAGTTGAAGATCACAGCTTTTATTCTGCGTTCCTTCGCTGATATCTATTATGTACTTAATATTTTCATTCAATTTCGTAGCGCTTTTATAAGTCCTATTGAAGGGGGTATTTTGAATAAAGATCCAGGGGCGATAGCCAGGCGATGCATTTCAATTTACTTCCTGATTGACATTTTGTCAGTTCTTCCCCTTCCACAGGTGTTATTTATCATCATCCCCAAATGGAAAGGCTCAGTAATTTCGAATATGAAGTTCTTGTTGTGGTCTATTGTTCTATTCCAGTATTTTCCAAGGTTTCTCCGAATATATCCACTGTACAAAGTAGTCAGAAGAACGGTCATAATCACTAAAACGGCATGGGTTGGAGCTGTTTTCAATTTCTCTCTTTACATGCTTGCAAGCCATATATTTGGAGCCTTTTGGTACTTGCTTTCGATCGAGAGAGAACATACATGCTGGCGGGATGCCTGTAGGAATATCACTGGATGCAATGGTGCTTCTTTATACTGTGGAGATTGCAGAACTGAAGGAGGCAATGCATTTGTATATGCCTCTTGTCCTATTATTGAGCCAAATACCACACTCTTTGATTTCGGTATATACCTTGATGCTCTTCAGTTGGGTGTGGTGGAGTCAAGAGATTATCCTCGAAAGTTATTTTACTGCTTTTGGTGGGGCCTGCAAAATCTGAGTTCTCTTGGTCAAAACCTGAAAACAAGCACTTACCCTGGGGAGGTTTCCTTTGCTGTTTCCGTTTCCATCTTCGGCTTGTTTTTATTTACGCTTCTCATTGGCAATGTGCAGACATATCTTCAGTCCAATACCATTAAATCAGAAAAAGAGATGAGAGCAAAATTGCAAGATGTAGAGCAATGGATGTCTCATACTTCGCTCCCAAAGTACCTGAGGCGGCAGATCAGGCGCTATGAACATTACAGATGGAAAAATACAAGAGGGTTTGATGTAGAGAATCTACTTACTAACCTTCCCAAGGACCTCAGGAGGGAAATCAAGAACCATCAAAGATCGGCTTTAGTTAGGACAGTGCCAATGTTTAAAGAAATGGATGACTACCTATTCGATGCACTCTATGATCGCCTCAAACGAGTGTTCTACATAGAGGACGACTACTTCATCCGTGAGGGGAACCCAGTTGAGGAGATGCTCTTCATCATGCGGGGCAAGTTAAGTGTGACCACCAATGGCGGAATGACTGGCCTCGTTAACTCTGATTATCTCAAGGCTGGGGACTTCTATGGAGTAGAGCTGCTCACGTGGGCCCTGGAGCCCCACTCATCTAACCTCCCCATGTCGACCAGAACTGTGCAGGCTGTGACGGAGGTTGACGCCTTTGCTCTCATGGCCAATGACTTGAAGCTTGTGGCCTCCCAGTTTCCGCAGCTCCACAGTAAGCAATTCATGCACATTTTCAGGTTCTACTCGCAGCAATGGAGGACATCGGCTGCCTGCAACATTCAAGCAGCATGGCGCCATTACTATAAGAAGAAGCTGGAGGAGTCTTCATGTAAGGAGGATAGGTTGCAGGCAACATTGGTCAGGGGGGATGGGAACTCATCTAGGCTCAGTGCAACCATATATGACGCTGCACGTGCCCTACGGCGTAGGCATACAAACAAGGTTGTTGGAGACAGTACCACCAATGCTGCATCAGAAGCCAGCAAAGCTTGA 2661 0.4352 MGTVYVPLVCHYNGELKHDTRNPIYVGGHMKADRVSKDISFREFILKMRELCKLPPDGTTIRIKFRYLLDQYTSIAMQVEDDDSLSIIMDLYPHHCYAIVAYIEKHPAQNSTTTTRRCYLPDSLAGSHKEEAMGEVSVRQVVGNTIDTVKQGDVQNHEGMRYTFNASPIHMHETPSSSIVADHLHDMANTPVNAHSLNHLAGGSCNNTESVVIEMSSKASEVPLSLPRYYSGNISTISSSVSERIQRGFAWGSEGVKRIRTSLNFLESTTDSSSQMKVLHPRDQFLQRWNEICLLLCVIAVYTDALFLYIPVIDGKKNCFGFDEKLKITAFILRSFADIYYVLNIFIQFRSAFISPIEGGILNKDPGAIARRCISIYFLIDILSVLPLPQVLFIIIPKWKGSVISNMKFLLWSIVLFQYFPRFLRIYPLYKVVRRTVIITKTAWVGAVFNFSLYMLASHIFGAFWYLLSIEREHTCWRDACRNITGCNGASLYCGDCRTEGGNAFVYASCPIIEPNTTLFDFGIYLDALQLGVVESRDYPRKLFYCFWWGLQNLSSLGQNLKTSTYPGEVSFAVSVSIFGLFLFTLLIGNVQTYLQSNTIKSEKEMRAKLQDVEQWMSHTSLPKYLRRQIRRYEHYRWKNTRGFDVENLLTNLPKDLRREIKNHQRSALVRTVPMFKEMDDYLFDALYDRLKRVFYIEDDYFIREGNPVEEMLFIMRGKLSVTTNGGMTGLVNSDYLKAGDFYGVELLTWALEPHSSNLPMSTRTVQAVTEVDAFALMANDLKLVASQFPQLHSKQFMHIFRFYSQQWRTSAACNIQAAWRHYYKKKLEESSCKEDRLQATLVRGDGNSSRLSATIYDAARALRRRHTNKVVGDSTTNAASEASKA* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00327 886 SUPERFAMILY Voltage-gated potassium channels 281 596 - -
Eupl08g00327 886 SMART cnmp_10 675 804 IPR000595 -
Eupl08g00327 886 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 270 860 - -
Eupl08g00327 886 Gene3D - 291 597 - -
Eupl08g00327 886 Gene3D Helix hairpin bin 601 665 - -
Eupl08g00327 886 ProSiteProfiles cAMP/cGMP binding motif profile. 675 759 IPR000595 -
Eupl08g00327 886 Gene3D Jelly Rolls 673 790 IPR014710 -
Eupl08g00327 886 Pfam Ion transport protein 288 599 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl08g00327 886 CDD CAP_ED 675 792 IPR000595 -
Eupl08g00327 886 SUPERFAMILY cAMP-binding domain-like 602 798 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00327 Eupl-Chr8 5656571 5675410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00327 231 864 Ion Channels AT5G53130 59.816 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00327 K05391 - nnu:104603993 751.51