Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00324 ATGAACGGAAGTTTCGTGAAGAAATCGACGAATGCTCGCCAGAAAAGATTAGAGATCAGACGGTTGAAATCAGTCGACTCAAATGAGAACCTTGTATCAGACGATGTCCATGTCCATCAAAACTTTGCAAAGAAGAGAAGATCGTGTGATAGAGCGATACCCTGTCGTACCGTAACCGCCTCAGCAGCATCATCAGAGAACGACGTCGGCGCAGGAGTTGGGATTTTAGTTTCAGGAACCGGAGAAATATGCGGAGAAGGAGAGAATATGCAGAGTTTGGTTTGTTTATCACACGGGTCGATTTCGGTGTGCGGACGGAGGAGAGAGATGGAAGATACAGTAACAGTAGCTCCTGGGTTTTTATCAAACGAGATTGTACGGTATGATTTTTTTGCGGTGTATGATGGACATGGTGGGTCCAAGGTAGCACAAGCCTGTAGAGATCGGCTACACCGAGTACTTGCTAAGGAGATTGAAGATGAGGATGAAGAAGAACATGAGCATGAGCTGGATTGGGAGAAGGTCATGTCCGCTTCTTTCTCAAAGATGGACGATGAGGTTAATGGGAGAAGACTTGAAATGGGAGACGGATCCGGATCCGGTTCCGGTTCAACGAATACCGTCGGGTCAACTGCAGTGGTGGCGATCGTGGGAACGGATAAACTCGTCGTAGCAAATTGCGGCGATTCGAGAGCCGTCATATCCCGCGGAGGCGTCGCCGTACCGCTCTCCCGCGATCATAAGCCTGATAGGCCTGATGAACTGGAAAGAGTGGAATCTGCTGGTGGAAGGATCATAAACTGGAACGGTTACCGTGTCCTAGGAGTACTTGCTACTTCTAGATCTATAGGGGATCACTACCTCAAACCCTATGTTATCTCGGAACCAGAGGTCACAGTTAGTCAGCGAACCGTGAACGACGAGTTCCTGATACTAGCAAGCGACGGTTTATGGGATGTCATGTCAAACGAAGTAGCATGTGAGGTTGTAAGAAGATGCCTTGATGGCCGAATGGTGAGGAGATTTTTGGAGACTGTAAACGGAAGCGCTGCTGCTGCGGAGGCAGCGGCAGTGCTAGCGGAGCTAGCAATGGCTCGGGGGAGCAAAGACAACATTAGCATAGTCGTAGTCGAGCTTAAGTAA 1143 0.4908 MNGSFVKKSTNARQKRLEIRRLKSVDSNENLVSDDVHVHQNFAKKRRSCDRAIPCRTVTASAASSENDVGAGVGILVSGTGEICGEGENMQSLVCLSHGSISVCGRRREMEDTVTVAPGFLSNEIVRYDFFAVYDGHGGSKVAQACRDRLHRVLAKEIEDEDEEEHEHELDWEKVMSASFSKMDDEVNGRRLEMGDGSGSGSGSTNTVGSTAVVAIVGTDKLVVANCGDSRAVISRGGVAVPLSRDHKPDRPDELERVESAGGRIINWNGYRVLGVLATSRSIGDHYLKPYVISEPEVTVSQRTVNDEFLILASDGLWDVMSNEVACEVVRRCLDGRMVRRFLETVNGSAAAAEAAAVLAELAMARGSKDNISIVVVELK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00324 380 FunFam Protein phosphatase 2C 51 90 380 - -
Eupl08g00324 380 PANTHER PROTEIN PHOSPHATASE 54 379 IPR015655 GO:0004722|GO:0006470
Eupl08g00324 380 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Eupl08g00324 380 SMART PP2C_4 87 377 IPR001932 -
Eupl08g00324 380 ProSiteProfiles PPM-type phosphatase domain profile. 97 379 IPR001932 -
Eupl08g00324 380 SMART PP2C_SIG_2 111 379 IPR001932 -
Eupl08g00324 380 CDD PP2Cc 97 379 IPR001932 -
Eupl08g00324 380 Gene3D - 91 380 IPR036457 -
Eupl08g00324 380 Pfam Protein phosphatase 2C 98 372 IPR001932 -
Eupl08g00324 380 SUPERFAMILY PP2C-like 92 379 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00324 Eupl-Chr8 5599446 5603655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00324 98 380 PP2C-type Phosphatase Gene Family AT2G29380 52.560 2.24e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00324 K14497 - nnu:104600371 444.121