Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00322 ATGGCTTATAGGCGGAGCATCTCCACCAGAGTCAGCCTTCTCAAACAACGGTTCCACCCATCTTTTACTCATATTCTTCACGACGATGATGGTAAATGCCAGCCTCCTGCTGCAGATCCATCTCGACCAACAATTAATAATTTCCTGCAAAGAGGTTACTACAACAGCAATATGATCAGTGCATCCTCTGGATATGGTGGTTTCTTTCGACAAAGAGGATGTTCTTCCTTCTCTTTACCTTTGGGGCTTGGATCCTCAATCTGTAGTTATTCGTCGAGTGCAATCGGAGAAGGGTCAGATAAGATAGAGTACATGAGTGACGTTGCTGAAATTCTCACGGAGAAGAGTGTGGAAATGGCAGCCTCCCAGGCTCCCATTATGAGTGAAGTGGCTATTGCAGCTGCAGATTCTTATTTCCCTGTTGCTGCCTTGCAATATGTAATTGATGGTGTTCATTCTTTTACCGGCTTGAATTGGTGGGCTTCCATAGCTTTGACAACTATTATGATTCGAGGTTGTACAGTTCCTCTTCTAATAAATCAACTCAAAGCTAGTCAAAAACTTGCTTCGATGAGGCCTCAATTGGAGGAGATCAAACAACAAATGGAAGATAAGGCGATGGATCCCAAGGCTGTGGCTGAGGGTCAGATACGAATGAAGGCGTTATTCAAGGAGCATGGGGTCACTCCATTTACTCCGTTGAAGGGACTTTTTATCCAGGGTCCTGTTTTCATAAGCTTTTTCATGGCTATTACAAACATGGTAGAGAAAGTTCCATCTTTTAAAGGGGGTGGAGCGTTCTGGTTTACTGATCTCACAACTCCAGATAGTTTATACATCTTTCCAGTTCTGACATCATTGACCTTCTTGATTACTGTGGAGAGCAATATGCAAGAGGGTATGGAAGGAAATCCTGTTGCTGGCACCATGAAAAACTTTTCCAGGATCGTTGCTGTTCTAACAGTTCCGTTTACAATGAGTTTCCCTAAGGCAATATTTTGTTATTGGATTACCTCTAATATCTTTTCGCTCATATATGGGCTAGTTATTAGACGCCCTCAGGTGAAGAAGTTCCTGGGTATTCCTGAGATGCCTGTGGCACCTACTACTGCACCACGACCTGCTTTCTCTTTGTTTTCGACATCCAAAACATCCACCCCAGCGACAAAAGAACCTTCTTTGTTACCGGCCGAGCCATCAAAAATTACTGACCGAAGAATACCTTCCTCTTCAGTTATAAGTCAGCGGCTTAGAAGTCTAGAAAAACAAGTGAAGGGAAGAAAGAAAAACAAGAAGAGGTGA 1302 0.4324 MAYRRSISTRVSLLKQRFHPSFTHILHDDDGKCQPPAADPSRPTINNFLQRGYYNSNMISASSGYGGFFRQRGCSSFSLPLGLGSSICSYSSSAIGEGSDKIEYMSDVAEILTEKSVEMAASQAPIMSEVAIAAADSYFPVAALQYVIDGVHSFTGLNWWASIALTTIMIRGCTVPLLINQLKASQKLASMRPQLEEIKQQMEDKAMDPKAVAEGQIRMKALFKEHGVTPFTPLKGLFIQGPVFISFFMAITNMVEKVPSFKGGGAFWFTDLTTPDSLYIFPVLTSLTFLITVESNMQEGMEGNPVAGTMKNFSRIVAVLTVPFTMSFPKAIFCYWITSNIFSLIYGLVIRRPQVKKFLGIPEMPVAPTTAPRPAFSLFSTSKTSTPATKEPSLLPAEPSKITDRRIPSSSVISQRLRSLEKQVKGRKKNKKR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00322 433 MobiDBLite consensus disorder prediction 381 433 - -
Eupl08g00322 433 CDD 5TM_Oxa1-like 156 353 - -
Eupl08g00322 433 NCBIfam membrane protein insertase YidC 158 351 IPR028055 -
Eupl08g00322 433 Pfam 60Kd inner membrane protein 159 351 IPR028055 -
Eupl08g00322 433 MobiDBLite consensus disorder prediction 404 418 - -
Eupl08g00322 433 PANTHER OXA1 114 425 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00322 Eupl-Chr8 5560873 5578340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00322 162 352 Chloroplast and Mitochondria Gene Families AT2G28800 21.538 2.59e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00322 K03217 - nnu:104600369 600.127