Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00300 ATGTATGCAGATACGGGGATTCTATTCCCTTATTTTCAGAGCTTCTCTCATGAATTTCAACACCTCGAGGAATTCTGCGGAATCCAGAAAACTAATGCTTCGAGGAGCAACCTGGTTCAGACCTCCACTGTAACCGAATACGACCTGGGAGGAGAAGGAGATTTGTTCAAAGCTCCGGAGCCCATCATCGAAGAACCAATGATGGGCCTTGACCCCATGACAGCCGCCATTTCGATGATTTCATGTGGAGAAGATGCCATCTCCCCCCAAACCATGAAGATTGCGGACATCGAATCGATTCAAAGTGACCAACTGTTCAGTGAGGTCTTCTATGAATGCAAGAAGGATCTCTTGGCAAAATCTGCCATCAGAGAACCATTTCCTGAAATCCCTGATGTCAAGATTCCTGCCATGCATGTAGAGATTCCAATTGCAGAGAAAGATAGCTTGATTTCAGAGGGGCCAATCCAGAAAAGTGTTAGTTCTGGGTGTTTGAGCTCAATGGAATGGATGCATGGTAGTGCAATGAGACCAAGTTTTCTGGATTTTAACGGAGTGAACTTTGAAGCTGCTTATGGGATGCGGAGGGCATTTAGTGAGGGAGACATACAGACTCTGGACAATGGCAATACCAACCTCATTCATCCTACCTTTAAGCGATCAGTAACGATCGGCAACTACACAATCGAAGAACGTAGGCAAAAGCTTTCCAGATACAGGAAGAAGAAGACAAAGAGGAACTTTGGCAGGAAAATCAAGTATGCCTGCAGGAAAGCTTTAGCAGACAATCAGCCAAGGGTCCGAGGCAGGTTTGCGAAGACTGAAGAATGA 831 0.4561 MYADTGILFPYFQSFSHEFQHLEEFCGIQKTNASRSNLVQTSTVTEYDLGGEGDLFKAPEPIIEEPMMGLDPMTAAISMISCGEDAISPQTMKIADIESIQSDQLFSEVFYECKKDLLAKSAIREPFPEIPDVKIPAMHVEIPIAEKDSLISEGPIQKSVSSGCLSSMEWMHGSAMRPSFLDFNGVNFEAAYGMRRAFSEGDIQTLDNGNTNLIHPTFKRSVTIGNYTIEERRQKLSRYRKKKTKRNFGRKIKYACRKALADNQPRVRGRFAKTEE* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00300 276 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Eupl08g00300 276 Pfam CCT motif 232 274 IPR010402 GO:0005515
Eupl08g00300 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 153 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00300 Eupl-Chr8 4828725 4835009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00300 208 276 C2C2-CO-like Transcription Factor Family AT5G57660 41.096 6.71e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl08g00300 CCT 3.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00300 - - nnu:104604799 436.417