Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00282 ATGGGCTACGGCAGGCTCGGTTCTTCCGAGTCTATTGGTTCAATTGCTTCGTTACCCGAACCTATCCCGAACCAGAGCTCAACACCAGATAGGAGAAGGCGTAAGTTCATTCTCCTTGCTCTCCTCTCTCTTGTCCTACTCATCGGCTGCGCAATCTCAGCCGTACTCCTTGTTCATCTCCGAACCAGAGGCTCTGTTGGATCCGAATCTACTTTCGGGAGGAAACCAACCCAAGCCATTTCCAAAACCTGTAGCAAGACTCGTTACCCGAGTCTCTGTGTCAATTCGCTCCTCGACTTCCCTGGCGCACTCTCCGCCGGCGAACGTGATCTCGTCCATATCTCCGTCAATATGACACTCCAGCGTGTCGGTAAGGCTTTGTACAGTGCAACGGAGATCAATAATTTGGCAATGGACACACGTGTACGATCAGCATATGAGGACTGTCTCGAGCTTTTAGAAGAGTCGGTGGATCAGCTTTCGCGGTCTTTATCTTCCGTCTCGCCATCCTTGGATGGAAGTGAACAGAAGATAGGGTCCACAGACGACGTCAGGACGTGGCTGAGCGCGGCTCTTACGAATCAGGACACGTGTACGGATGGATTTGAGGATGTGAGTGGGTACGTGAAGAATCAGATGCAAACGCAGTTGAAGGATCTATCTGAATTGGTGAGTAATTGTTTGGCGATCTTTTCGGTTTCTAGTGACGACGATGACTTTTCCGGTATTCCGATTCAAAACCGCCGGAGATTGATGGAAAGTAGTTTACCGGTAGAGGAGAGTGGTTTTCCGGCTTGGGTAACGAAGAAAGAAAGGAGATTATTGGCGACGCCGATATCGGCGATGCAAGCCGATATTGTGGTGTCGAAAGACGGTAACGGGACGTATAAGACGATCGCCGAGGCGATTAAAGCAGCTCCGCAGCAGAGTACTCGCCGAACGATTATTTACGTGAGGGCAGGAAGGTACGAAGAGAAATTTCTGAAAGTGGGGAGGAAAAAAATGAACCTCATGTTTATAGGAGACGGGAAGGGCAAAACAATAATTTCAGGTCGAAAAAGCGTGGCTGATGGCATTACAACATTCCACACGGCTTCCTTCGCTGCGACTGGGGCCGGGTTTATCGCACGGGATATGACATTCGAGAACTCGGCGGGCCCCGGCAATCATCAAGCGGTGGCCCTCCGAGTGGGGGCAGATCATGCGGTGGTGTACCGATGTAACATTATCGGCTACCAAGATACCTTGTACGTGCACTCGCAGCGACAATTCTTCCGTGAATGTGATGTATACGGTACAGTCGATTTCATATTTGGAAACGCTGCAGTGGTTATCCAGAATTCTACGCTATACGCTCGCAAGCCCATGGCGCAACAAAAGAACACAATAACGGCCCAAAACCGGAAGGACCCGAATCAGAACACAGGCATCTCGATCCATAATTGTCGGATAGTCCCAGCATCGGATCTTGCAGCAGTCAAGGGCTCCTTCCCGACGTATCTTGGCCGTCCGTGGAAAATGTACTCAAGAACAGTTTACATGCTATCGTCCATGGGGGATCACATTCATCCACGTGGATGGCTTGAGTGGAACGGAAATTTCGCACTTGATACACTGTACTATGGAGAGTACATGAACTACGGTCCGGGTGCAGCCGTCGGGCAGCGGGTCAAATGGCCTGGGTACCGGGTCATCACCTCACCATTGGAGGCGAGCAAGTTCACTGTGGCGAAATTTATATACGGATCGTCTTGGCTACCGTCAACTGGTGTGGCTTTCTTGGCGGGACTATCGGTTTAA 1800 0.5067 MGYGRLGSSESIGSIASLPEPIPNQSSTPDRRRRKFILLALLSLVLLIGCAISAVLLVHLRTRGSVGSESTFGRKPTQAISKTCSKTRYPSLCVNSLLDFPGALSAGERDLVHISVNMTLQRVGKALYSATEINNLAMDTRVRSAYEDCLELLEESVDQLSRSLSSVSPSLDGSEQKIGSTDDVRTWLSAALTNQDTCTDGFEDVSGYVKNQMQTQLKDLSELVSNCLAIFSVSSDDDDFSGIPIQNRRRLMESSLPVEESGFPAWVTKKERRLLATPISAMQADIVVSKDGNGTYKTIAEAIKAAPQQSTRRTIIYVRAGRYEEKFLKVGRKKMNLMFIGDGKGKTIISGRKSVADGITTFHTASFAATGAGFIARDMTFENSAGPGNHQAVALRVGADHAVVYRCNIIGYQDTLYVHSQRQFFRECDVYGTVDFIFGNAAVVIQNSTLYARKPMAQQKNTITAQNRKDPNQNTGISIHNCRIVPASDLAAVKGSFPTYLGRPWKMYSRTVYMLSSMGDHIHPRGWLEWNGNFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSPLEASKFTVAKFIYGSSWLPSTGVAFLAGLSV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00282 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 233 IPR035513 -
Eupl08g00282 599 FunFam Pectinesterase 279 597 - -
Eupl08g00282 599 NCBIfam pectinesterase inhibitor domain 69 232 IPR006501 GO:0004857
Eupl08g00282 599 PANTHER PECTINESTERASE 48 587 - -
Eupl08g00282 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 234 IPR035513 -
Eupl08g00282 599 ProSitePatterns Pectinesterase signature 2. 430 439 IPR033131 -
Eupl08g00282 599 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Eupl08g00282 599 Pfam Pectinesterase 285 582 IPR000070 GO:0030599|GO:0042545
Eupl08g00282 599 CDD PMEI-like_3 84 230 - -
Eupl08g00282 599 FunFam Pectinesterase 76 234 - -
Eupl08g00282 599 SMART PMEI_2 75 230 IPR006501 GO:0004857
Eupl08g00282 599 Gene3D - 279 597 IPR012334 -
Eupl08g00282 599 SUPERFAMILY Pectin lyase-like 280 596 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00282 Eupl-Chr8 4444072 4447429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00282 1 599 Carbohydrate Esterase AT3G49220 64.145 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00282 - - nnu:104604796 889.026