Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00278 ATGTTACCGTTGCAGGAGCATTGGCTACCGCTTTCAAATCTAGACTTGCTTCTACCACCGGTAGACGTTGGTGTTTTCTTTTGTTACAAGAAACCAAACAAAAGCAAGAACTTCACGTCCATGGTTAGTGTCCTCAAGAAAGCTTTGGCTCAAGCTCTCGTCTCTTATTATGCATTTAGTGGAGAAGTCATGATGAACTCCGTCGGCGAGCCGGAACTTCTCTGTAACAATCGAGGGGTCGATTTCGTCGAAGCTTATGCCGATGTCGAGCTTAAAGATCTCCAGCTGTATAATCCGGACGCAAGTGTGGAAGGGAAGCTGGTACCCAAGAAGAATGAAGGCGTGTTCAGTGTTCAGGTGACTGAGCTTCGATGTGGCGGCCTTGTCGTCGGATGCACGTTTGACCATCGAGTAGCGGATGCCCACTCAGCCAACATGTTCCTTGTTGCATGGGCGGAAAGTGCACAAGCAAAAGCAATATCTCTTCCCCCATCTTTCCGACGATCACTACTCAACCCACGTCGGCCGGGGTTCTGCGATGCTTCCATTGACAGTATGTATGTGCCGATATCGACATTGCCGCCTCCGACAGATCCCCAGCCCGGAGCCGATCATATCGTAAGCCGCATCTACTACATCTCTGCTGAGAAAATAAATTGGCTTCAGTCACAGGCCAGCTCCAATGGTTATAAAAGAAGCAAACTTGAGTCTTTCAGTGCATTTTTGTGGCATATTGTTGCTAAAGCCACTTATGACAATGCCAAGAGTTGCAAGATGGGTATCGTAGTTGATGGACGGACAAGATTAAGCGATGGGGAAGGAGATAAAGGAGATAAAACACCTTCCTTGAGTAATTACTTTGGGAATGTGCTTTCAATTCCTTATGGAGAGGCAAGCGTCAATGAGCTTAAGTCAAAGCCATTGAGTTGGGCGGCTGATGTCGTGCATGACTATTTGGAAACTGCAGTTACAAAGGAGCATTTCTTGGGGTTGATAGACTGGGTGGAGGCCCACCGCCCGGAGCCGGCATTAGCGAAGATATATTGCACCGGGAGCGACGATGGAGTGGCGTTTGTAGTGTCATCGGGGCAGCGGTTTCCGGTGTCGAAGGTAGATTTTGGGTGGGGTAGGCCGGCTTTTGGGTCCTACCATTTTCCATGGGGCGGGAATGCTGGATACGTGATGCCAATGCCAAGCCCGAGCAGGAATGGAGATTGGGTGGTGTACATGCACATGTTGAAAGGGCATTTGGATTTGTTAGAGGCAGAAGTTGGTGATGTTTTTAAGCCATTGAATTCTGAATATCTTAACTTAGTGGCTGAAGATTAG 1329 0.4838 MLPLQEHWLPLSNLDLLLPPVDVGVFFCYKKPNKSKNFTSMVSVLKKALAQALVSYYAFSGEVMMNSVGEPELLCNNRGVDFVEAYADVELKDLQLYNPDASVEGKLVPKKNEGVFSVQVTELRCGGLVVGCTFDHRVADAHSANMFLVAWAESAQAKAISLPPSFRRSLLNPRRPGFCDASIDSMYVPISTLPPPTDPQPGADHIVSRIYYISAEKINWLQSQASSNGYKRSKLESFSAFLWHIVAKATYDNAKSCKMGIVVDGRTRLSDGEGDKGDKTPSLSNYFGNVLSIPYGEASVNELKSKPLSWAADVVHDYLETAVTKEHFLGLIDWVEAHRPEPALAKIYCTGSDDGVAFVVSSGQRFPVSKVDFGWGRPAFGSYHFPWGGNAGYVMPMPSPSRNGDWVVYMHMLKGHLDLLEAEVGDVFKPLNSEYLNLVAED* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00278 442 Gene3D - 191 423 IPR023213 -
Eupl08g00278 442 Gene3D - 2 184 IPR023213 -
Eupl08g00278 442 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 399 - -
Eupl08g00278 442 Pfam Transferase family 3 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00278 Eupl-Chr8 4401053 4404160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00278 12 421 Monolignol Biosynthesis Gene Families AT5G48930 28.638 4.19e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00278 - - vvi:100265101 645.195