Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl08g00277 | ATGGAACTGGAAGTAGACACCAATGGCTTATTGGAAGAATCTATTTTTGAAATTGATGGTGATATTGATGACACTGCTTTTGAGAATGAAAGATGTGGAATATGCATGGATATTATCATTGACAGGGGAGTTCTGGACTGCTGCCAGCACTGGTTCTGTTTTGCATGCATTGACAACTGGGCTACCATCACAAACCTCTGCCCGCTTTGCCAGAATGAATTTCAATTGATCACATGTGTTCCAGTGTATGATACGATTGGAAGCGGTAAGGCTGAGGATGACTCGCTCTCCAGAGATGATGATTGGAGCATTCAAGGGAAGAATAACACTCTCTCTTTTCCTTCATACTACATTGATGAAAATTTATCTGTTTGGATGGAGATGGCTGCAAGATACGAAGTGGACCGGCAACAACTGAGGAAGATTCAAATCTTGATACATCAATTGCTTGTGATTCATGTGATTTATGGTACCATGCTTTTTGTGTGGGATTTGATCCAGAAGGCACATCTGAGAATTCATGGTTATGCCCAAGGTGTGTAG | 543 | 0.4144 | MELEVDTNGLLEESIFEIDGDIDDTAFENERCGICMDIIIDRGVLDCCQHWFCFACIDNWATITNLCPLCQNEFQLITCVPVYDTIGSGKAEDDSLSRDDDWSIQGKNNTLSFPSYYIDENLSVWMEMAARYEVDRQQLRKIQILIHQLLVIHVIYGTMLFVWDLIQKAHLRIHGYAQGV* | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl08g00277 | 180 | ProSitePatterns | Zinc finger RING-type signature. | 48 | 57 | IPR017907 | - | |
Eupl08g00277 | 180 | Pfam | Ring finger domain | 31 | 71 | IPR001841 | - | |
Eupl08g00277 | 180 | SUPERFAMILY | RING/U-box | 26 | 77 | - | - | |
Eupl08g00277 | 180 | SMART | ring_2 | 32 | 70 | IPR001841 | - | |
Eupl08g00277 | 180 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 108 | IPR013083 | - | |
Eupl08g00277 | 180 | ProSiteProfiles | Zinc finger RING-type profile. | 32 | 71 | IPR001841 | - | |
Eupl08g00277 | 180 | PANTHER | F18C1.6 PROTEIN | 27 | 109 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl08g00277 | Eupl-Chr8 | 4387144 | 4390319 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl08g00277 | 13 | 74 | C3H Transcription Factor Family | AT2G39100 | 33.846 | 1.91e-09 | 53.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl08g00277 | - | - | rcu:8288033 | 271.166 |