Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00271 ATGGATTTTCCGTCCGATCAGCAATGCAAACGTACTGGTACTTACCCTTGGCGCTGCAGTAAGATGGCTTTGCCAGGAAAATCTTTATGTGAGAAGCATGATTTGCAGCGACAGAAGTATAAAGAGACGAGCAGAGAAAAAAAGATGAAAAGTTCTGGCAAAGTCGCCAGTGGTGATGTCGCTGAAGAAGAGATTGTTCGTCGGAGAGGCGACGATGGCCCATCAAGAGGTTTGAAGCGGAAGAGGACGAGTTGTGGTGGGGAAGAAGATGAGGACCGGTGCGGTGAAGAAACGAATGTTAAGGTTCCGAAGAAGAGAGGGAGGAAACCCAAAGATTATCGTAGGGATGATGGATCTGGTGTGGAGGTGAGGAAGATGGAGTTCATGAACAGGATTCCGGCGAATGAGCAACAAAAGGAGAGGTCTTTATATAAGATGGAGAGACAAGATTGCGTTTTCCACAACGGAAGGAAGGTCTCCCACGAAGATGTAAAGGATTCCGGCAAAAAAAAGGCGAGTTCTAGTGAATTGTTGGTGGAATCCGGCAAGAGGCAGAGGAATTCCGGTGAAGAGCAGAGGAATTCCAGTAAAAGTAGGAAGGGTTCGGGCAAAAAACAGGAATTTTTGGTGGAATCCGGTGAAGGGCATAGGAATCCCGGCGAAGGTAGGAAGGATTCCGGTGTAGGGGAGAGAGTTGGCAAGAACAAAGCGATTTCTGTGAACGGAGCGTCAAAGATAGGCTTCTCGGCAAACGAGGCCCTCCTTAATAGTAATGGGAAAGAAAATGGGGATTCTGCCAAGGGCACAGGGAGTGTAGGCCAGGGGATGAGGAATTCGAGCATCCACAGAAAGGGGAGTCTGAGGAATGGAGACGCAGAGATGGGATTAGTGGATGTTACCGGTAAGACCAAGGAGCAGAGGAGTTTAATGTGTCACCAATGTCAGCGGAATGATAAGAGTGGTGTTGTGTTCTGTTCCAATTGCGAAAGAAAACGTTATTGCTATGAATGCCTTGCAAAGTGGTACCCCGGAAAAACAAGAGAGGAAATTGAGAATGCATGCCCCGTCTGTCGTGGCAATTGCAATTGCAAAGCTTGCTTGCGGGCAGAGATAGTGATGGCTAGCCATCAGGAAGCAGATGACAATGTCAAACTGCAACGGCTGCTCTATTTGCTACATAGAGTTCTGCCTCTCCTCAGACAAATTCACTTGGAGCAGAGCTCTGAAATGGGGATGGAAGCCAAGATACGAGGAGTTCAACCGACTGAAGTGGATGTAGCAAGGTCTAAACTTGATGAGAATGAGCGTCGATACTGCGACAATTGCAATACATCCATTGTTGATTTCCACAGAAGCTGCCCCGACCCTGATTGTTCCTATGATCTCTGTCTCACATGTTGTCGGGAACTAAGGGAAGGTCACCAGCCTGGAGGTAATGAAGCGGAATCTTCTCATAGACAGTTCGTTGAAAGAGCTCATGGTCAAGGTACAAATATGGAACACCAAACTAGAGCACCAAGGAAAAGATTTGGATGGGAGAGCCAAGTGTCAACAGCACCAAACAATTGTATGAGGAATGCATTCGGCCACTTTCCTGATTGGAGAGGAAATGCTGATGGTAGCATTCCATGTCCTCCAAAAGTGCGTGGTGGTTGTGGGTCTAAGATACTTGAATTGAGACGCAACTTCAAAGCTAATTGGGTAGTCAAGCTGCTTAAGAATGCCGAGGAACTTACTAGCAATTGTCAGTTCTCGGATGGTGATTTTTCCCTGGGGTGTCCTTTGTGCCTTACTTCTGCAGGGAATGACAGAAAAAATTCTGAAGTGAGGCAGGCAGCTTTTAGGGAGAACAGTCATGACAACGTTTTGTACTGCCCAAATGCTGTTGACTTGAGAGATGACGAACTTGAGCATTTTCAGAAGCACTGGATGAGAGGTGAACCTGTTATCGTTAGAAATGTACTTGAAAAGACATCTGGTCTTAGTTGGGAACCATTGGTCATGTGGAGAGCCTTTAGAGAGACAGGCGCCAAAGGAAAGCTCAAAGAGGAGACACGAAGTGTGAAGGCCATTGATTGCTTGGATTGGTGTGAGGTTGAAATTAACATTCACCAGTTCTTCATAGGCTACTTAGAGGGTCGTATGCATAGGAATGGATGGCCAGAGATGTTGAAGTTGAAGGACTGGCCCTCGTCGAGTTCATTTGAAGATCGTTTGCCAAGGCACGGTGCTGAATTTATTGCTGCACTCCCATATAGTGACTATACTCATCCGAAGTCTGGTCTTCTGAATCTTGCTACAAAGCTTCCAGTACAGAGCTTGAAACCAGACTTAGGACCGAAAACATACATTGCATACGGATTTTCGGAAGAAATTGGCAGAGGTGATTCGGTAACAAAGCTGCATTGTGATATGTCTGATGCGGTAAATGTACTGACACACACAACTGAAGTGAAGATTGCTACTTGGCAACATGATCGCATAAGGAAGATTCAGAAGAAACATAAAGCTGAAGACTTGCGTGAACTCATTGTTGAGAAAAATGCCACGACAAAACAGCTAAAACAACCTAGCAAACGTGAAGTCATGGAGGCTGAACCTACAGAACATGTGGACACTGGTGAGAATGAGTCTCCTTTGCTAGAAAAGATGAGTGTAAAGGAAGAGAAATTGGATAAACAGCAGCTTGATGCAGAACGCTATTCCTCTCCCAAACACGAACACATTTTTGGAAAGGGTTTGGAAACTAGAAGGGAAGATAGACAACACGTGGACAGTGAAGTTTCTTCATATCCAAAATCTAAGGATATATTTGAGAGGTCCTTGCCATTGTCAGATTCCATGGCATTGGAACTTGGCGGACCAGATAAAGAACAATCTGTTGCTGAAATCCCTGCTTCTCTAGAATGTAGGGTGATTGTTGATACGGATGCAAAGTTGCTTGGAGAGCTGAATACAAATCCTTGCCATCAAGTACATGAGTTGAAAGAATCCAGCTTCTCAAATTGTGGCGACATTCTTAAGACGAACTCATTGCTGGAAAAAAATGATGGAAAGGCAGGTGAATCAGATAAAGAAGAAGTTGAGGTGAAACAAAGCTCTTTACCATGCACTGGTGATGCTAAGGATAGTTTGTTGCCTCCAAGTCCGGATCTGGAGACAAGAACATCAGAGCATTGTGGGATAGAAGAAGTCATGGATCTGGAGAAATCCGATAAACATCACTCTATAAACAATGGACTCAATAAATGTGTCAAAATTGTTGATAGGAATTCATTTGTGCCTGAAAGCATGGATGGGGACTTAGAAACACGAGAAAAAAAGATATCTGAAATGAACGAATCTTGTTCTCCAAAATGCAGGGATGTTTCTCATGGGAACTTCTCTTTGCCAGATGAGATGGATGCAGTCTCCAGCTGTCCTGCTGCTAAAGTTTTATGTTGTGGTCACGGACTTGATGTTGAGTGTGAAATGGAAGCTGACAGAGATTCATGCAATCAAGAATATGTTCTCCCCTCTAATATAACTGAGGAAAATAAGCTCATTGATGGGCAACATGGTTTGGCAATATCTATTTCAGGAGATAATGCAGCGAATGTTTCAGAGTCAAAGAAACCAGATCAAAATGTGATGAATGATTCTCATCAAAATAGTGACACTTCGAAGGTTGCCAATGGAGGTGCCATTTGGGACATTTTTCGAAGGCAGGATGTACCAAAGTTAATTGAGTACTTGCAGAAGCATTGTAAAGAATTTCACCATATCGATAATCTTCCTGTCAATTCTGTTATTCATCCTATTCATGATCAGACCCTATTCTTGAATGAAAGGCATAAGAAACAATTGAAAGAGGAGTTTAATGTTGAACCTTGGACATTTGAGCAATACCTTGGGGAGGCGGTTTTTATTCCGGCAGGATGTCCTCATCAAGTGAGAAATAGACAGTCATGCATTAAAGTGGCCCTTGACTTTGTATCTCCTGACAACGTTCAAGAATGCATTCGGTTGACAGAAGAGTTCCGTTTACTCCCAAAAAACCACAGGGCCAAGGAAGATAAATTGGAGCTGAAGAAGATGACCCTATATGCTGTAAGTGCAGCTGTGAGAGAAGCCAAAAGTTTGATATCTAAACTCAAGGACTGGAGTGGAACTATTGAATGGCTTTAA 4167 0.4396 MDFPSDQQCKRTGTYPWRCSKMALPGKSLCEKHDLQRQKYKETSREKKMKSSGKVASGDVAEEEIVRRRGDDGPSRGLKRKRTSCGGEEDEDRCGEETNVKVPKKRGRKPKDYRRDDGSGVEVRKMEFMNRIPANEQQKERSLYKMERQDCVFHNGRKVSHEDVKDSGKKKASSSELLVESGKRQRNSGEEQRNSSKSRKGSGKKQEFLVESGEGHRNPGEGRKDSGVGERVGKNKAISVNGASKIGFSANEALLNSNGKENGDSAKGTGSVGQGMRNSSIHRKGSLRNGDAEMGLVDVTGKTKEQRSLMCHQCQRNDKSGVVFCSNCERKRYCYECLAKWYPGKTREEIENACPVCRGNCNCKACLRAEIVMASHQEADDNVKLQRLLYLLHRVLPLLRQIHLEQSSEMGMEAKIRGVQPTEVDVARSKLDENERRYCDNCNTSIVDFHRSCPDPDCSYDLCLTCCRELREGHQPGGNEAESSHRQFVERAHGQGTNMEHQTRAPRKRFGWESQVSTAPNNCMRNAFGHFPDWRGNADGSIPCPPKVRGGCGSKILELRRNFKANWVVKLLKNAEELTSNCQFSDGDFSLGCPLCLTSAGNDRKNSEVRQAAFRENSHDNVLYCPNAVDLRDDELEHFQKHWMRGEPVIVRNVLEKTSGLSWEPLVMWRAFRETGAKGKLKEETRSVKAIDCLDWCEVEINIHQFFIGYLEGRMHRNGWPEMLKLKDWPSSSSFEDRLPRHGAEFIAALPYSDYTHPKSGLLNLATKLPVQSLKPDLGPKTYIAYGFSEEIGRGDSVTKLHCDMSDAVNVLTHTTEVKIATWQHDRIRKIQKKHKAEDLRELIVEKNATTKQLKQPSKREVMEAEPTEHVDTGENESPLLEKMSVKEEKLDKQQLDAERYSSPKHEHIFGKGLETRREDRQHVDSEVSSYPKSKDIFERSLPLSDSMALELGGPDKEQSVAEIPASLECRVIVDTDAKLLGELNTNPCHQVHELKESSFSNCGDILKTNSLLEKNDGKAGESDKEEVEVKQSSLPCTGDAKDSLLPPSPDLETRTSEHCGIEEVMDLEKSDKHHSINNGLNKCVKIVDRNSFVPESMDGDLETREKKISEMNESCSPKCRDVSHGNFSLPDEMDAVSSCPAAKVLCCGHGLDVECEMEADRDSCNQEYVLPSNITEENKLIDGQHGLAISISGDNAANVSESKKPDQNVMNDSHQNSDTSKVANGGAIWDIFRRQDVPKLIEYLQKHCKEFHHIDNLPVNSVIHPIHDQTLFLNERHKKQLKEEFNVEPWTFEQYLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPDNVQECIRLTEEFRLLPKNHRAKEDKLELKKMTLYAVSAAVREAKSLISKLKDWSGTIEWL* 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00271 1388 Pfam WRC 6 44 IPR014977 -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 60 103 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 1014 1055 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 258 287 - -
Eupl08g00271 1388 Gene3D Cupin 621 879 - -
Eupl08g00271 1388 Gene3D Cupin 1189 1350 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 1200 1221 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 851 881 - -
Eupl08g00271 1388 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1168 1350 - -
Eupl08g00271 1388 ProSiteProfiles JmjC domain profile. 758 1341 IPR003347 -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 28 53 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 110 124 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 138 231 - -
Eupl08g00271 1388 FunFam Transcription factor jumonji (JmjC) domain-containing protein 622 878 - -
Eupl08g00271 1388 Pfam JmjC domain, hydroxylase 1226 1324 IPR003347 -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 258 283 - -
Eupl08g00271 1388 SUPERFAMILY Clavaminate synthase-like 636 1361 - -
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 28 232 - -
Eupl08g00271 1388 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 305 379 IPR018866 -
Eupl08g00271 1388 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 6 1376 IPR045109 GO:0032454|GO:0033169
Eupl08g00271 1388 MobiDBLite consensus disorder prediction 1015 1031 - -
Eupl08g00271 1388 SMART cupin_9 739 1341 IPR003347 -
Eupl08g00271 1388 ProSiteProfiles WRC domain profile. 3 48 IPR014977 -
Eupl08g00271 1388 ProSiteProfiles Zinc finger RING-type profile. 311 358 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00271 Eupl-Chr8 4306994 4335489 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl08g00271 JmjC 1.5e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00271 K15601 - msin:131245196 1256.89