Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00268 ATGGAACCAGAAATCCAGCGTAAAATCGAGGAAACAGTGATCGAGATCTTGAAAATCGCGGACATGGACGAGATGACTGAATTCAAGGTCCGAAATATGGCTGCAGAGAAGCTCGGGCTCGACCTCTCAGGTCCTGAGCACAAGCGATTCGTCAGGCGAGTCGTCGAGTCGTTCCTCCTCTCCAGGGAAGAAGAGCAGGCCGCACCAGCAGCTGCAGAAGAAGAAACTAAAGAGGCCGAAGAAGAAGAAGAAGAAGAAGAGGACGCGAAGCCGGGCGTATCAGCAAAAGAATACGACGATGATGGCGATCTCATCATTTGCAGGCTATCGAACAAAAGAAAAGTGACGATTCAAGATTTCAGAGGGAAGACTTTGGTGTCTATAAGGGAGTACTACGAAAGAGATGGAAAGCAGCTTCCTTCCTCTAAAGGAATAAGCTTGACAACTGAACAGTGGTCAGCTTTCAGCAAAGCTGTCCCTGCTATAGAGGAAGCCATCAAGAAGATGGACTCAAGGTTGAGTTGA 525 0.4819 MEPEIQRKIEETVIEILKIADMDEMTEFKVRNMAAEKLGLDLSGPEHKRFVRRVVESFLLSREEEQAAPAAAEEETKEAEEEEEEEEDAKPGVSAKEYDDDGDLIICRLSNKRKVTIQDFRGKTLVSIREYYERDGKQLPSSKGISLTTEQWSAFSKAVPAIEEAIKKMDSRLS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00268 174 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 171 IPR045125 GO:0003713|GO:0060261
Eupl08g00268 174 FunFam RNA polymerase II transcriptional coactivator KELP 96 172 - -
Eupl08g00268 174 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Eupl08g00268 174 PIRSF RNA_polymII_KELP 1 173 IPR017415 -
Eupl08g00268 174 MobiDBLite consensus disorder prediction 63 98 - -
Eupl08g00268 174 Coils Coil 70 90 - -
Eupl08g00268 174 Pfam DEK C terminal domain 7 59 IPR014876 -
Eupl08g00268 174 Gene3D Transcriptional Coactivator Pc4; Chain A 95 173 IPR009044 GO:0003677|GO:0006355
Eupl08g00268 174 Pfam Transcriptional Coactivator p15 (PC4) 107 157 IPR003173 GO:0003677|GO:0006355
Eupl08g00268 174 SUPERFAMILY ssDNA-binding transcriptional regulator domain 106 168 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00268 Eupl-Chr8 4261533 4264644 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Eupl08g00268 DEK_C 3.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00268 K25815 - ming:122081309 243.047