Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00264 ATGGGGAGAAAGGGGAACTGGTTCACATCGGTGAAGAACGTCTTCAAGTCGTCGTCTTCGTCTTCTTCTTCCAAGGACTTGGACAAAAAGAAAGAAAATGTAGATAAGTGGCAACCTGACACGCCGGATGTTGTGTCCTTCGAACATTTTCCGGCCGAAACTTCTCCGGAAGCGACAAATGACGAGAGCACATCGCAGTCTCCGGTGACTGAAGATAGAAACCATGCAATCGCCGTTGCGATGGCAACTGCAGCGGCGGCAGAAGCAGCGGTTGCAGCCGCACAAGCCGCAGCGAAAGTCGTCCGGCTTGCCGGTTATGGACGTCATTCTAAAGAAGAGAGGGCTGCCACCTTCATACAATCGTATTACAGAGGTTACCTAGCCCGGAGAGCTTTGCGCGCTTTGAAGGGCCTTGTGAGACTACAGGCGCTTGTGCGGGGACATAACGTTCGGAAGCAAGCGCAGATGACTATGCGGTGCATGCAGGCCTTGGTGCGTGTACAAGCCCGAGTAAGAGCGCGGCGGCTCCACTTAGCCCACGAAAAACTTCGAAAGAAAGAAGAAGAAGAAGATGAAGAAGAAGAAATGGAAGATCAAGGAGCAAGAGGGGGGAAGAATCTGTATTCGAAGAGGTTTGACATGGAGAATTGGGATGGGAGGCATCAGAGCTTGGACATGATCAAGGAACATTCGCAGCGGAAACACGACGCCGTGATCAGACGGGAGAGAGCCCTTGCTTATGCTTACTACCAGCAACAACAACAACAGCATCACTTCTTGCAATCGGATCCAAACGCTAACAACGCCGATATTTATGCGAAGGATGGTGAGAAGCCACAGTGGGGATGGAATTGGCTCGAACGTTGGATGGCGTCGCAACCATGGCATGCCCGTCACTTGTCACCACTAGAAGGCTCCTACGTTACGAAGACAGATGACATGTCGGAAAAGACGGTCGAGATGGACATGATAACACCATCGGGGTCAGACTCAATCAACACAGGTCCACTCGGCAGGAACCCAGCTGAATCGTTCCGGTTCACAACCCAACAACAGCGACAGACGGGTCAAGAAACGTTCCCTAGCTACATGGCCACGACACAGTCGGCAAAAGCAAAGGTACGTAGTCAGGGTTCGGTGAAGCAGCGTGCCCCAGCAGCGTATCAGTGGAATCCGTCAACGAGGAGGGGATCAGTTGCGGGGTCGGGTGGTGACTCGTCGAGTTCGGGTGGAGGAACTGCAATCTACCAGGCACCAAGGAGCCCGAGTCCGAAAAATAATGGGGTGCGTATGCATGGGAGGAGGTTTACGGGGTATAGCCCGGATTCAAGCGGGGGAGACGAAAGGACCCAGCCTTTCGGGGGTCATGGACGAAGGCAAGACTTCGAATGA 1392 0.5316 MGRKGNWFTSVKNVFKSSSSSSSSKDLDKKKENVDKWQPDTPDVVSFEHFPAETSPEATNDESTSQSPVTEDRNHAIAVAMATAAAAEAAVAAAQAAAKVVRLAGYGRHSKEERAATFIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLHLAHEKLRKKEEEEDEEEEMEDQGARGGKNLYSKRFDMENWDGRHQSLDMIKEHSQRKHDAVIRRERALAYAYYQQQQQQHHFLQSDPNANNADIYAKDGEKPQWGWNWLERWMASQPWHARHLSPLEGSYVTKTDDMSEKTVEMDMITPSGSDSINTGPLGRNPAESFRFTTQQQRQTGQETFPSYMATTQSAKAKVRSQGSVKQRAPAAYQWNPSTRRGSVAGSGGDSSSSGGGTAIYQAPRSPSPKNNGVRMHGRRFTGYSPDSSGGDERTQPFGGHGRRQDFE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00264 463 MobiDBLite consensus disorder prediction 23 38 - -
Eupl08g00264 463 MobiDBLite consensus disorder prediction 348 424 - -
Eupl08g00264 463 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Eupl08g00264 463 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Eupl08g00264 463 SMART iq_5 134 155 IPR000048 GO:0005515
Eupl08g00264 463 SMART iq_5 111 133 IPR000048 GO:0005515
Eupl08g00264 463 Pfam Protein of unknown function (DUF4005) 349 410 IPR025064 -
Eupl08g00264 463 MobiDBLite consensus disorder prediction 56 71 - -
Eupl08g00264 463 MobiDBLite consensus disorder prediction 348 463 - -
Eupl08g00264 463 MobiDBLite consensus disorder prediction 15 71 - -
Eupl08g00264 463 Coils Coil 176 199 - -
Eupl08g00264 463 MobiDBLite consensus disorder prediction 184 205 - -
Eupl08g00264 463 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Eupl08g00264 463 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Eupl08g00264 463 Gene3D - 109 160 - -
Eupl08g00264 463 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00264 Eupl-Chr8 4131955 4137740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00264 1 427 IQD Protein Family AT3G49260 49.119 1.05e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00264 - - nnu:104604775 469.159