Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl08g00235 | ATGGATTTGCAAATTCAAGCACGAGTGAAGATCAATCAACCATGTGCTGCATGTCGAATGCTTCGCCGGAGATGCGGCGTTAACTGTCAATTAGCACCGTACTTTCCGGCTGACGAAGTCGAGAACTTTGCAGGTGTACACAAAGTGTTTGGTGCTAGCAATCTTATCAAAATGCTTCAGATGGTGGAGGAAAGCAAGAGGGGGGATGCTGTGAAGAGCATAGTCTATGAAGCGAGAGCAAGAGTAGAAGACCCCGTTTATGGAAGTGCAGGTTCCATTTTCTACTTGCAGAAGCACCTTGAAGATCTAAAGGCACAATTGGAGCTGACAAGAGCTAGAATTCTGGAGTCGGAAGAAGAAAGAAACCAGCTTCTAAGGGTTCTAATGGATGTTCACAGCTTCCGTCCAATATCACCCATTGATGATGCAATGTTTGACTGTTGTGATCTCTTGTTAGACGAGAGAACGATGGGCTACGACCCTGTTGAATTTCCAATAGATTCTGACTGGATGCTTTCATAA | 522 | 0.4483 | MDLQIQARVKINQPCAACRMLRRRCGVNCQLAPYFPADEVENFAGVHKVFGASNLIKMLQMVEESKRGDAVKSIVYEARARVEDPVYGSAGSIFYLQKHLEDLKAQLELTRARILESEEERNQLLRVLMDVHSFRPISPIDDAMFDCCDLLLDERTMGYDPVEFPIDSDWMLS* | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl08g00235 | 173 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 120 | - | - | |
Eupl08g00235 | 173 | Coils | Coil | 100 | 120 | - | - | |
Eupl08g00235 | 173 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Eupl08g00235 | 173 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 111 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl08g00235 | Eupl-Chr8 | 3805630 | 3807026 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl08g00235 | 14 | 131 | AS2 family | AT1G07900 | 50.000 | 6.40e-40 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Eupl08g00235 | LOB | 2.3e-37 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl08g00235 | - | - | ming:122061636 | 247.669 |