Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00228 ATGGCGTTGCTGAGTCAGCAGTTGCAGAGATCCCTATTGAGCGGAATCAACTGCAGCTCAGTCTTGACGACGAAGAAGAACATCGTCAAGGAGAGAAGCCGATGCTGCTCTGCGATCGCAATCGATGCTCCATCGTCGTTAACGAGCGTTGCTGGGATCAGATGGGGTTCGGCCCGATTACAGGGTTTACGAGAAGAGATGGAAGACGATGTTGTTGTTCGATCAGACGACCTCAATGGATTCTCCTTTGCCGCAGTCTTCGATGGTCATGCTGGCTTCTCATCAGTCAAATTCCTCCGGGATGAGTTGTACAAAGAGTGTGTAGGGGCTTTACAAGGCGGGTTGCTGTTGAGTGACAAAGATTTCAGTGATGTAAAAGTGGCATTACAGGAGGCTTTTGTAAATGCTGATACAAAATTATTGAACTGGCTTGAAGTGACAGGGGAGGAAGTTGATTCTGGTTCAACAGCTACGGTTATGTTTGTTGGAAATGATGTGCTGATTATTTCACATGTTGGTGACTCATGCGTGGTTCTTTCCCGCTCTGGAAAAGCAGAAGTATTGACCAATCCTCATCGACCTTATGGAAACAACAAGGCTTCTCTTCAAGAAATCAGGAGGATCAGAGAAGCAGGTGGATGGATTGTAAATGGAAGGATTTGCGGAGACATCTCTGTATCCCGTGCTTTTGGTGACATGCGATTCAAGACAAAGAAGAATGAAATGTTGGAGAAAGGAGTTGAGGAGGGAACATGGTCCAAAAAGTTTATTTCTCGAGTACAATTCAATGGAGATTTGGTTATTGCTTCTCCAGATATTTATCAAGTGCCTCTCAGATCAGATGCAGAATTTATATTATTAGCATCTGATGGCCTATGGGATTACATGAACAGCTCAGATGCAGTAACATTTGTTAGGGATCAACTTCGACAACATGGCAATGTTCAGCTAGCTTGTGAAGCACTTGCACAAGCAGCTTTGGACCGACGCTCACAAGATAATGTTAGCATTGTGATAGCCGATTTGGGGTATGTTCCTGTTTCTCCAATACATGTACAAAACAAGATTATCCCTTTGGACCAAATGAGTCAAAGGGATTCATTGTTGTCACTACACTGA 1119 0.4415 MALLSQQLQRSLLSGINCSSVLTTKKNIVKERSRCCSAIAIDAPSSLTSVAGIRWGSARLQGLREEMEDDVVVRSDDLNGFSFAAVFDGHAGFSSVKFLRDELYKECVGALQGGLLLSDKDFSDVKVALQEAFVNADTKLLNWLEVTGEEVDSGSTATVMFVGNDVLIISHVGDSCVVLSRSGKAEVLTNPHRPYGNNKASLQEIRRIREAGGWIVNGRICGDISVSRAFGDMRFKTKKNEMLEKGVEEGTWSKKFISRVQFNGDLVIASPDIYQVPLRSDAEFILLASDGLWDYMNSSDAVTFVRDQLRQHGNVQLACEALAQAALDRRSQDNVSIVIADLGYVPVSPIHVQNKIIPLDQMSQRDSLLSLH* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00228 372 PANTHER PROTEIN PHOSPHATASE 2C 58 340 IPR015655 GO:0004722|GO:0006470
Eupl08g00228 372 SMART PP2C_4 44 340 IPR001932 -
Eupl08g00228 372 CDD PP2Cc 53 342 IPR001932 -
Eupl08g00228 372 Gene3D - 53 344 IPR036457 -
Eupl08g00228 372 FunFam Protein phosphatase 2C 57 53 348 - -
Eupl08g00228 372 SUPERFAMILY PP2C-like 47 343 IPR036457 -
Eupl08g00228 372 Pfam Protein phosphatase 2C 56 335 IPR001932 -
Eupl08g00228 372 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Eupl08g00228 372 ProSiteProfiles PPM-type phosphatase domain profile. 54 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00228 Eupl-Chr8 3700480 3707379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00228 1 319 PP2C-type Phosphatase Gene Family AT4G27800 63.110 8.69e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00228 K04457 - nnu:104604743 561.992