Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00171 ATGGCCGGTGCAGAGACGAGGTTGGTGCAGGAACTGCTATTGTACGCCGCAAGCGCTGCCATGAGTTGCTTGGTGTTGTTCGCAGGTCTTCGACATCTCGATCCCAATCGCGCTGCGAGCAAGAAAGCCCTAGAACAGAAGAAGGAAATCTCTAAGCGATTAGGTCGCCCACTCATCAACACCAATCCTTACGAGGATGTAATAGCCTGCGATGTCATAAATCCTGACCATATTGATGTGGAGTTTGACTCTATTGGAGGCTTGGACAACGTTAAGCAGGCATTGTATGAATTGGTGATTCTTCCACTCCGACGACCTGATTTGTTTTCACATGGGAAGCTTCTCAGTCCACAAAAAGGGGTATTGTTGTATGGACCACCTGGAACGGGAAAGACAATGCTTGCCAAGGCCATAGCAAAAGAGTCTGGCGCTGTATTCATTAATGTGCGGATATCTAATTTGATGAGCAAATGGTTTGGTGATGCGCAAAAACTTGTGGCTGCTGTATTCAGTTTGGCTTATAAGCTCCAGCCTGCTATTATATTCATTGATGAGGTCGATAGTTTTTTGGGACAGCGCCGTACTACTGACCATGAAGCCTTGACTAACATGAAAACCGAGTTCATGGCTTTATGGGATGGTTTTACCACAGATCAGAATGCTCGGGTAATGGTCCTTGCTGCAACGAACCGACCATCAGAACTCGATGAGGCAATACTTCGGCGTCTTCCCCAGGCCTTTGAGATTGGCATACCCGACCGCAGTGAGAGAGCCAAGATATTGAAGGTGATTTTGAAGGGTGAGAAGGTAGACAACAGTATCGACTATGACCGTATAGCAAGTTTGTGCGAGGGATACACTGGTTCAGATCTTCTCGAACTCTGCAAGCAGGCAGCCTACTTTCCTGTTAGGGACCTACTAAGCGATGAAAAGGACGGCAAGCCATCTTATACACCAAGGTCACTGTCACAGTTGGATCTGGAGAAAGTTCTTGCCACATCAAGGAAGACGAGGGTTGCGGCAAGTGAATACAGTAGGTTAAGCCCACAATCATCGACATGGTCAAGGAACAGGAACGATGATGATTATCAGGTCCAGGATGCACTCTCAGAGCTCTCTAAGCTTGTGTTGTCCCATATTATGAACCTTCGACCAGGAGCCCAGGACCCTTAA 1173 0.4749 MAGAETRLVQELLLYAASAAMSCLVLFAGLRHLDPNRAASKKALEQKKEISKRLGRPLINTNPYEDVIACDVINPDHIDVEFDSIGGLDNVKQALYELVILPLRRPDLFSHGKLLSPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRSERAKILKVILKGEKVDNSIDYDRIASLCEGYTGSDLLELCKQAAYFPVRDLLSDEKDGKPSYTPRSLSQLDLEKVLATSRKTRVAASEYSRLSPQSSTWSRNRNDDDYQVQDALSELSKLVLSHIMNLRPGAQDP* 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00171 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 353 - -
Eupl08g00171 390 SMART AAA_5 117 253 IPR003593 GO:0016887
Eupl08g00171 390 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Eupl08g00171 390 FunFam ATPase family AAA domain-containing protein 1 79 256 - -
Eupl08g00171 390 Pfam AAA+ lid domain 273 306 IPR041569 -
Eupl08g00171 390 Gene3D - 79 336 IPR027417 -
Eupl08g00171 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 306 IPR027417 -
Eupl08g00171 390 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Eupl08g00171 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Eupl08g00171 390 CDD RecA-like_ATAD1 84 249 - -
Eupl08g00171 390 Gene3D - 252 332 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl08g00171 Eupl-Chr8 3090759 3098105 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00171 80 311 Calmodulin-binding Proteins AT3G56690 34.322 4.89e-37 141