Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00151 ATGTTGGAGAGAGAGGAGTGCTCTCCAGAAACAACAGCAGCATCAAAGGAAGAGTCCTTAATCCGTCTGGACATGTTTCCCATGACCATGAAGAAGAAAAAGAAGAATAAGAGGAGGTTCAGTGATGAACAGATTAAGTCGTTGGAGTCTATGTTCGAGTCAGAATCAAAGCTTGAACCCAGAAAGAAGCTGCAGATAGCAAGAGACCTCGGGTTGCAGCCTCGTCAGATTGCTATATGGTTTCAGAATAGGAGAGCTCGATGGAAGTCGAAGCAGCTCGAACGAGACTATAGCATACTCAAAGCCAATTATGATTCTCTAGCTTCCCGCTTCGAGTCCATGAAGAAAGAGAAGCAGTCCTTAATGATACAGTTGCAGAAGCTGAGTGACATGCTAGGAGGGGGTTCGGCTAGAAACAACACTGATGGTGACTTGGATAAAGGAAACATCAAATGCGAATCTGAACAGAAACCCAGCCTTTCGTTGGAAGGATCAGACCTTAGAGTGGTCACAAGCTCAAATGATGAAAAAAGTAAAAATGTTGCTTATTTTGAGCAGGAAGAAGAACGCAACCTTATGAATATGGCGGAGCCCGCTGATGGAGTCTTAACATCACCTGAAAACTGGTGCAGTTTCGACTCGAGTGGTCTGTTCGATCAGTCATGTAGCAGTTCACAATGGTGGGAGTTTTGGTCTTGA 699 0.4464 MLEREECSPETTAASKEESLIRLDMFPMTMKKKKKNKRRFSDEQIKSLESMFESESKLEPRKKLQIARDLGLQPRQIAIWFQNRRARWKSKQLERDYSILKANYDSLASRFESMKKEKQSLMIQLQKLSDMLGGGSARNNTDGDLDKGNIKCESEQKPSLSLEGSDLRVVTSSNDEKSKNVAYFEQEEERNLMNMAEPADGVLTSPENWCSFDSSGLFDQSCSSSQWWEFWS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00151 232 Gene3D - 28 98 - -
Eupl08g00151 232 SUPERFAMILY Homeodomain-like 23 93 IPR009057 -
Eupl08g00151 232 Pfam Homeobox associated leucine zipper 91 132 IPR003106 GO:0006355|GO:0043565
Eupl08g00151 232 Pfam Homeodomain 34 89 IPR001356 GO:0003677
Eupl08g00151 232 ProSitePatterns 'Homeobox' domain signature. 66 89 IPR017970 GO:0000981|GO:0006355
Eupl08g00151 232 CDD homeodomain 38 92 IPR001356 GO:0003677
Eupl08g00151 232 PRINTS Lambda-repressor HTH signature 62 71 IPR000047 GO:0003677
Eupl08g00151 232 PRINTS Lambda-repressor HTH signature 71 87 IPR000047 GO:0003677
Eupl08g00151 232 ProSiteProfiles 'Homeobox' domain profile. 31 91 IPR001356 GO:0003677
Eupl08g00151 232 FunFam Homeobox-leucine zipper protein ATHB-7 21 91 - -
Eupl08g00151 232 Coils Coil 90 131 - -
Eupl08g00151 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 31 192 IPR045224 GO:0003700
Eupl08g00151 232 SMART HOX_1 33 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00151 Eupl-Chr8 2831674 2833372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00151 28 232 Homeobox Transcription Factor Family AT2G46680 45.607 9.63e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl08g00151 Homeodomain 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00151 K09338 - nnu:104593490 308.916