Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00147 ATGGGGCAGTGCTACGGCAAGAACATCTCTGTCGTAGAAGACGACGACGCTGTCGGTGGCAATCGCCCACAAACGCCGTCAACTTCAACGGCGGCTAACGGTGTCGTTAATGTTTCGTCTGTGAAAAATACGCCGGCTCACTCTTCTTCTACAGCTACAAGCCCTTGGCCTAGCCCTTATCCTCATGGGAGTCCTCTACCTGGTGGAGTATCTCCGTCACCGGCGAGGTCGGGAAAGTCGACTCCCCGGAGATTCTTGCGCCGGCCGTTCCCTCCTCCGTCGCCGGCGAAGCATATCAAGGCGTTTCTTGATAAGCGGCAGGGCCAGGCAAAGCCGAAGGAGAGGCCGATTCCGGAGGACGGAGCCGAAGTAGAGCGGCCACTCGATAAGAGCTTCGGATACGGGAAGAATTTTGGGGCGAAGTACGAATTGGAGAAGGAGGTTGGGCGGGGGCATTTTGGTCATACATGTTCGGCGAAAGCCAAGAAGGGAGAGCTTAAAGGTCAACCGGTTGCGGTGAAGATCATCTCCAAAGCTAAGATGACAACAGCAATATCTATTGAAGATGTACGTAGGGAGGTGAAAATCTTGAAAGCGTTATCTGGGCATATGAATCTGGTCAAATTTCATGATGCATGTGAGGATGCAGATAACGTCTACATAATCATGGAATTGTGTGAAGGTGGAGAATTACTTGACAGAATTTTATCGAGAGGTGGAAGATACACTGAGGAAGATGCAAAAGTTATTGTTGTGCAAATCTTAAGTGTAGTTGCCTTTTGTCATCTTCAAGGGGTTGTGCACCGTGATTTAAAACCGGAGAATTTTCTTTTTACCACTAGAAACGAAGATGCTCCGATGAAGCTCATTGATTTTGGTCTTTCTGACTTTATCAGACCAGAGGAAAGACTCAACGACATTGTTGGCAGTGCATACTATGTTGCACCTGAAGTACTTCATAGATCGTACAGTCTGGAAGCAGATATTTGGAGCATCGGTGTCATAACATATATTTTGTTATGTGGAAGCAGACCTTTCTGGGCACGAACAGAGTCGGGAATTTTTCGTTCTGTGCTAAGAGCTGATCCTAACTTTGATGACTCACCTTGGCCTGCCGTATCTCCAGAAGCCAAAGATTTTGTAAAAAGGCTCCTGAACAAGGACCACAGAAAAAGAATGACTGCTGCACAAGCTCTGACTCACCCATGGTTGCGAGATGAAAACCGCTCTGTGACTTTAGATATATTGATCTATAAGTTAGTGAAGTCATACCTTCGTGCCACACCATTCAAACGTGCAGCTTTAAAGGCTCTATCAAAAGCTTTAACAGAGGATGAGCACATATACCTCAGGGCTCAGTTTAAGCTGTTGGAACCAAATAAAGATGGGCGAGTCTCCCTTGAGAACTTCAAAATGGCTCTAATGCGAAATGCAACTGATGCCATGAAGGAGTCCAGGGTTACCGACATTTTAAATGTGATGGAACCACTTTCTTACAGAAAGATGGACTTTGAAGAGTTTTGCGCTGCTGCGATCAGCACATATCAGCTGGAGGCTCTTGAAGGATGGGAACAGATTGCCAGTACGGCTTTTGAGTACTTCGAACAGGAGGGCAATCGAGTTATCTCGGTAGAGGAATTGGCACGGGAAATGAATCTGGGTCCTACAGCTCACTCGGTGCTAAATGATTGGATGAGGAACTCTGATGGGAAGCTAAGTTTCTTGGGGTATACCAAATTTTTGCATGGTGTGACAAGTCGTGGCTCAAATACAAGACATCAGTAG 1785 0.4667 MGQCYGKNISVVEDDDAVGGNRPQTPSTSTAANGVVNVSSVKNTPAHSSSTATSPWPSPYPHGSPLPGGVSPSPARSGKSTPRRFLRRPFPPPSPAKHIKAFLDKRQGQAKPKERPIPEDGAEVERPLDKSFGYGKNFGAKYELEKEVGRGHFGHTCSAKAKKGELKGQPVAVKIISKAKMTTAISIEDVRREVKILKALSGHMNLVKFHDACEDADNVYIIMELCEGGELLDRILSRGGRYTEEDAKVIVVQILSVVAFCHLQGVVHRDLKPENFLFTTRNEDAPMKLIDFGLSDFIRPEERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDSPWPAVSPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRDENRSVTLDILIYKLVKSYLRATPFKRAALKALSKALTEDEHIYLRAQFKLLEPNKDGRVSLENFKMALMRNATDAMKESRVTDILNVMEPLSYRKMDFEEFCAAAISTYQLEALEGWEQIASTAFEYFEQEGNRVISVEELAREMNLGPTAHSVLNDWMRNSDGKLSFLGYTKFLHGVTSRGSNTRHQ* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00147 594 MobiDBLite consensus disorder prediction 1 123 - -
Eupl08g00147 594 MobiDBLite consensus disorder prediction 21 57 - -
Eupl08g00147 594 ProSitePatterns Protein kinases ATP-binding region signature. 148 174 IPR017441 GO:0005524
Eupl08g00147 594 ProSiteProfiles Protein kinase domain profile. 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00147 594 FunFam CDPK-related kinase 1 440 512 - -
Eupl08g00147 594 FunFam CDPK-related kinase 3 134 306 - -
Eupl08g00147 594 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Eupl08g00147 594 Gene3D Transferase(Phosphotransferase) domain 1 231 412 - -
Eupl08g00147 594 SUPERFAMILY Protein kinase-like (PK-like) 141 426 IPR011009 -
Eupl08g00147 594 SUPERFAMILY EF-hand 430 583 IPR011992 -
Eupl08g00147 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 126 569 - -
Eupl08g00147 594 MobiDBLite consensus disorder prediction 99 123 - -
Eupl08g00147 594 Gene3D - 413 585 - -
Eupl08g00147 594 FunFam Calcium-dependent protein kinase SK5 314 410 - -
Eupl08g00147 594 Pfam Protein kinase domain 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00147 594 CDD STKc_CAMK 141 403 - -
Eupl08g00147 594 FunFam CDPK-related kinase 1 135 230 - -
Eupl08g00147 594 SMART serkin_6 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl08g00147 594 Gene3D Phosphorylase Kinase; domain 1 136 230 - -
Eupl08g00147 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00147 Eupl-Chr8 2751634 2766242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00147 54 587 EF-hand Containing Proteins AT3G50530 64.336 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl08g00147 Pkinase 7.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00147 K13412 - nnu:104593544 996.882